Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd7A2AJK6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd7A2AJK6 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.2■□□□□ 0.18
Chd7A2AJK6 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd7A2AJK6 Gm25406-201ENSMUST00000157599 105 ntBASIC16.2■□□□□ 0.18
Chd7A2AJK6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Chd7A2AJK6 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.2■□□□□ 0.18
Chd7A2AJK6 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd7A2AJK6 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd7A2AJK6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chd7A2AJK6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.19■□□□□ 0.18
Chd7A2AJK6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.19■□□□□ 0.18
Chd7A2AJK6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.18■□□□□ 0.18
Chd7A2AJK6 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.18■□□□□ 0.18
Chd7A2AJK6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.18■□□□□ 0.18
Chd7A2AJK6 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Mir7023-201ENSMUST00000185093 64 ntBASIC16.18■□□□□ 0.18
Chd7A2AJK6 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.18■□□□□ 0.18
Chd7A2AJK6 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Chd7A2AJK6 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chd7A2AJK6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Chd7A2AJK6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.16■□□□□ 0.18
Chd7A2AJK6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Chd7A2AJK6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.15■□□□□ 0.18
Chd7A2AJK6 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.15■□□□□ 0.18
Chd7A2AJK6 Gm9172-201ENSMUST00000212092 954 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms