Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.44■□□□□ 0.06
IsxA1A546 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
IsxA1A546 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
IsxA1A546 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
IsxA1A546 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
IsxA1A546 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
IsxA1A546 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.43■□□□□ 0.06
IsxA1A546 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
IsxA1A546 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
IsxA1A546 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
IsxA1A546 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
IsxA1A546 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
IsxA1A546 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
IsxA1A546 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
IsxA1A546 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
IsxA1A546 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
IsxA1A546 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.42■□□□□ 0.06
IsxA1A546 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
IsxA1A546 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
IsxA1A546 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
IsxA1A546 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.41■□□□□ 0.06
IsxA1A546 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
IsxA1A546 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
IsxA1A546 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
IsxA1A546 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.41■□□□□ 0.06
IsxA1A546 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
IsxA1A546 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
IsxA1A546 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC15.41■□□□□ 0.06
IsxA1A546 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.41■□□□□ 0.06
IsxA1A546 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC15.41■□□□□ 0.06
IsxA1A546 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.41■□□□□ 0.06
IsxA1A546 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
IsxA1A546 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.41■□□□□ 0.06
IsxA1A546 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IsxA1A546 Gm7290-201ENSMUST00000104990 617 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Gm12918-201ENSMUST00000120234 636 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Gm15710-201ENSMUST00000121821 636 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Mir2861-201ENSMUST00000175539 82 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Gm5075-201ENSMUST00000196916 622 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
IsxA1A546 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
IsxA1A546 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.4■□□□□ 0.06
IsxA1A546 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
IsxA1A546 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
IsxA1A546 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
IsxA1A546 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
IsxA1A546 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms