Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav12-1A0N8R1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Gm13181-201ENSMUST00000120117 1069 ntBASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.82□□□□□ -0.2
Trav12-1A0N8R1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Gm7791-201ENSMUST00000219066 539 ntBASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trav12-1A0N8R1 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trav12-1A0N8R1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trav12-1A0N8R1 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms