Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc112A0AUP1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Gm3375-201ENSMUST00000203929 796 ntBASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc112A0AUP1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc112A0AUP1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc112A0AUP1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
Ccdc112A0AUP1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc112A0AUP1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc112A0AUP1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Gm715-201ENSMUST00000117865 831 ntBASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc112A0AUP1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc112A0AUP1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.87■□□□□ 0.61
Ccdc112A0AUP1 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms