Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Gm28729A0A1B0GSW2 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.1■□□□□ 0.17
Gm28729A0A1B0GSW2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Gm28729A0A1B0GSW2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm28729A0A1B0GSW2 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm28729A0A1B0GSW2 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm28729A0A1B0GSW2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Gm28729A0A1B0GSW2 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Gm28729A0A1B0GSW2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Gm10060-201ENSMUST00000212002 111 ntBASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Gm5867-201ENSMUST00000063197 592 ntBASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Gm28729A0A1B0GSW2 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms