Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Il3ra-202ENSMUST00000223589 738 ntBASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Trbv17A0A140T8P8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv17A0A140T8P8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv17A0A140T8P8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv17A0A140T8P8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv17A0A140T8P8 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Gm15565-201ENSMUST00000118890 427 ntBASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Gm2274-201ENSMUST00000184539 609 ntBASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv17A0A140T8P8 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Gm11539-201ENSMUST00000119837 557 ntBASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Gm13436-201ENSMUST00000120418 567 ntBASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv17A0A140T8P8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Gm4217-201ENSMUST00000182243 1002 ntBASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv17A0A140T8P8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trbv17A0A140T8P8 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms