Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm8668-201ENSMUST00000120559 1447 ntBASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trbv13-2A0A140T8N6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm6433-201ENSMUST00000118634 875 ntBASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm45058-201ENSMUST00000205810 766 ntBASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm8839-201ENSMUST00000121279 1645 ntBASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm5421-201ENSMUST00000181698 2354 ntBASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trbv13-2A0A140T8N6 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-2A0A140T8N6 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-2A0A140T8N6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-2A0A140T8N6 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-2A0A140T8N6 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trbv13-2A0A140T8N6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm13216-201ENSMUST00000117145 591 ntBASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.52□□□□□ -0.57
Trbv13-2A0A140T8N6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Gm45774-201ENSMUST00000211992 2665 ntBASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Trbv13-2A0A140T8N6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms