Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef4-208ENSMUST00000211073 171 ntBASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13186-201ENSMUST00000118031 316 ntBASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Actl10-202ENSMUST00000226583 1501 ntBASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm27463-201ENSMUST00000183569 57 ntBASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm43353-201ENSMUST00000199224 1295 ntBASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-2-dv6d-2A0A0G2JGQ7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms