Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 Haglr-201ENSMUST00000100000 2085 ntBASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm33142-201ENSMUST00000193913 867 ntBASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm18032-201ENSMUST00000222541 538 ntBASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav13n-4A0A0G2JG01 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav13n-4A0A0G2JG01 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm22697-201ENSMUST00000175194 63 ntBASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm6345-202ENSMUST00000180900 204 ntBASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav13n-4A0A0G2JG01 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm27741-201ENSMUST00000185060 237 ntBASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Gm4974-201ENSMUST00000209974 875 ntBASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav13n-4A0A0G2JG01 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms