Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC11.42□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav13d-4A0A0G2JFX3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms