Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Gm43072-201ENSMUST00000200283 1671 ntBASIC10.41□□□□□ -0.74
Igkv8-28A0A0G2JE47 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-28A0A0G2JE47 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Igkv8-28A0A0G2JE47 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Igkv8-28A0A0G2JE47 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Gm10493-201ENSMUST00000097270 612 ntBASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Igkv8-28A0A0G2JE47 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Igkv8-28A0A0G2JE47 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm10129-202ENSMUST00000193100 1316 ntBASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Gm19721-201ENSMUST00000195284 1764 ntBASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Igkv8-28A0A0G2JE47 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms