Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm10013-201ENSMUST00000106074 672 ntBASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav9-4A0A0B4J1K2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gfra2-202ENSMUST00000227633 1480 ntBASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav9-4A0A0B4J1K2 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trav9-4A0A0B4J1K2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms