Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trbv16A0A0B4J1H3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trbv16A0A0B4J1H3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm5643-201ENSMUST00000117081 966 ntBASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trbv16A0A0B4J1H3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC11.97□□□□□ -0.49
Trbv16A0A0B4J1H3 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms