Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm6576-201ENSMUST00000169678 883 ntBASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trbv13-3A0A0B4J1H2 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms