Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Ighv1-42A0A0A6YY38 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-42A0A0A6YY38 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Ighv1-42A0A0A6YY38 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-42A0A0A6YY38 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-42A0A0A6YY38 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-42A0A0A6YY38 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Gm11452-201ENSMUST00000122376 690 ntBASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Rps4l-201ENSMUST00000071745 943 ntBASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Gm18195-201ENSMUST00000207604 706 ntBASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 CT009713.7-201ENSMUST00000224689 571 ntBASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ighv1-42A0A0A6YY38 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
Ighv1-42A0A0A6YY38 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-42A0A0A6YY38 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms