Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm26039-201ENSMUST00000158152 144 ntBASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trbc1A0A0A6YWV4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trbc1A0A0A6YWV4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm23634-201ENSMUST00000175071 91 ntBASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm10566-201ENSMUST00000086739 996 ntBASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbc1A0A0A6YWV4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trbc1A0A0A6YWV4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms