Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trav6d-7A0A075B6B0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm10517-202ENSMUST00000192970 758 ntBASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm21814-202ENSMUST00000203277 873 ntBASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm9987-201ENSMUST00000069768 567 ntBASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Trav6d-7A0A075B6B0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm7977-201ENSMUST00000193787 748 ntBASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm43799-201ENSMUST00000201845 579 ntBASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Trav6d-7A0A075B6B0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trav6d-7A0A075B6B0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms