Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Mir5122-201ENSMUST00000175004 89 ntBASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Gm3375-201ENSMUST00000203929 796 ntBASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Il3ra-202ENSMUST00000223589 738 ntBASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trav9d-3A0A075B695 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Gm27000-201ENSMUST00000182943 842 ntBASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Gm5297-201ENSMUST00000198555 1171 ntBASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav9d-3A0A075B695 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Gm27463-201ENSMUST00000183569 57 ntBASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Gm5417-201ENSMUST00000079706 384 ntBASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav9d-3A0A075B695 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9d-3A0A075B695 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms