Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Gm33142-201ENSMUST00000193913 867 ntBASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav13-1A0A075B644 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Gm26039-201ENSMUST00000158152 144 ntBASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Gm8969-201ENSMUST00000199694 526 ntBASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13-1A0A075B644 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13-1A0A075B644 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13-1A0A075B644 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13-1A0A075B644 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13-1A0A075B644 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13-1A0A075B644 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13-1A0A075B644 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav13-1A0A075B644 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Gm11355-201ENSMUST00000121120 306 ntBASIC11.77□□□□□ -0.53
Trav13-1A0A075B644 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms