Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trav9n-4A0A075B631 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav9n-4A0A075B631 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.59
Trav9n-4A0A075B631 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav9n-4A0A075B631 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav9n-4A0A075B631 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9n-4A0A075B631 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Trav9n-4A0A075B631 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Gm29257-201ENSMUST00000186115 639 ntBASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav9n-4A0A075B631 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms