Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Gm10819-201ENSMUST00000099988 561 ntBASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Trav13d-1A0A075B606 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.16□□□□□ -0.46
Trav13d-1A0A075B606 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Gm9013-201ENSMUST00000132939 882 ntBASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav13d-1A0A075B606 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13d-1A0A075B606 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav13d-1A0A075B606 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC12.15□□□□□ -0.47
Trav13d-1A0A075B606 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Gm11355-201ENSMUST00000121120 306 ntBASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Gm26039-201ENSMUST00000158152 144 ntBASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav13d-1A0A075B606 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms