Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 AC093043.3-201ENSMUST00000226531 2273 ntBASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav6-1A0A075B5Z8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav6-1A0A075B5Z8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm18958-201ENSMUST00000174258 762 ntBASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav6-1A0A075B5Z8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Gm16011-201ENSMUST00000121567 2662 ntBASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav6-1A0A075B5Z8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms