Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 OR10AB1P-202ENST00000641219 1686 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AC024560.2-201ENST00000507981 1497 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 SNORA11C-201ENST00000408532 129 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AC092809.1-201ENST00000441469 474 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 GAPDHP36-201ENST00000480688 918 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 RPS6P4-201ENST00000494693 758 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 BTF3L4P4-201ENST00000506381 449 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 RNU6-319P-201ENST00000516025 108 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 SNORA70.17-201ENST00000516449 133 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 SUMO2P20-201ENST00000520803 283 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AL360157.1-201ENST00000565962 87 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 MTND2P13-201ENST00000577438 1039 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AC017100.2-201ENST00000584628 355 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AL135786.2-201ENST00000608422 615 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AL121772.2-201ENST00000614331 297 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 AL391597.1-201ENST00000618707 694 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 OR5AC4P-202ENST00000642086 985 ntBASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NPC1L1Q9UHC9 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AC018529.3-201ENST00000624212 2254 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AL355596.1-201ENST00000565399 3996 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 OR10J6P-201ENST00000289731 930 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 RNU6-819P-201ENST00000364116 107 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 SNORA73.2-201ENST00000364946 201 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AC092647.1-201ENST00000420654 287 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 RPL21P109-201ENST00000422213 475 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 MTCO1P51-201ENST00000427672 1060 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AF228730.2-201ENST00000438784 848 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 SETD6P1-201ENST00000444575 317 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 RAB28P3-201ENST00000448325 597 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 OR9N1P-201ENST00000491296 333 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 UBE2CP3-201ENST00000502715 450 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 CCNG2P1-201ENST00000549521 1000 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 RN7SL339P-201ENST00000580597 296 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 SNORA51-201ENST00000606420 132 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AL354760.1-201ENST00000608357 643 ntBASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.12□□□□□ -1.59
NPC1L1Q9UHC9 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 MTND2P11-201ENST00000423638 648 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 AJ239321.1-201ENST00000424255 564 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 AC002553.2-201ENST00000453217 340 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 RPL31P53-201ENST00000457065 348 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 MTND3P6-201ENST00000485242 339 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 HMGB3P14-201ENST00000494195 599 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 RPS27AP18-201ENST00000515536 459 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 AC090281.1-201ENST00000523019 276 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
NPC1L1Q9UHC9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 RNA5SP424-201ENST00000390988 115 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC104297.1-201ENST00000393779 870 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AL590704.1-201ENST00000402856 794 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 RAB9AP3-201ENST00000412737 573 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 HIGD1AP12-201ENST00000427832 281 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AL157884.3-201ENST00000448273 1184 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 RAB9AP1-201ENST00000449393 573 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC022336.1-201ENST00000475510 337 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC069499.1-201ENST00000489433 509 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 RN7SKP157-201ENST00000516174 282 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 OR7E13P-201ENST00000526052 910 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC092747.2-201ENST00000545069 983 ntBASIC5.1□□□□□ -1.59
NPC1L1Q9UHC9 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms