Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RPSAP50-201ENST00000481955 852 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 Y_RNA.655-201ENST00000515919 96 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AF186190.1-201ENST00000517470 480 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC087465.1-201ENST00000560574 245 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC068790.2-201ENST00000602601 557 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AL592148.2-201ENST00000612210 372 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC107075.1-201ENST00000613695 314 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC105227.2-201ENST00000615075 605 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AP002799.1-201ENST00000623552 423 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC092608.3-201ENST00000625017 386 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 U6.107-201ENST00000637108 79 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 AC138393.1-206ENST00000540997 1886 ntBASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.4□□□□□ -1.71
CLIP4Q8N3C7 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ELL2P3-201ENST00000457883 1602 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AL390862.1-201ENST00000635467 1469 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 OR10J6P-201ENST00000289731 930 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 MIR448-201ENST00000362131 111 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 RNA5SP305-201ENST00000362665 119 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 RNU1-20P-201ENST00000363314 162 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 U3.30-201ENST00000391308 210 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ATP5F1P3-201ENST00000397213 657 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AL080315.1-201ENST00000406055 466 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 LINC01881-201ENST00000416103 412 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC006960.1-201ENST00000419980 153 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 OR5AW1P-201ENST00000426334 1006 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 MTND1P32-201ENST00000433043 938 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 MTCO3P5-201ENST00000433620 714 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC112498.1-201ENST00000444401 332 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC010733.1-201ENST00000451515 401 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 OR2A20P-203ENST00000498397 1268 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC111000.2-201ENST00000507775 550 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 OR51K1P-201ENST00000510214 950 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC110775.1-201ENST00000513721 462 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 MTCO1P49-201ENST00000523429 802 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ELOCP32-201ENST00000548625 324 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC044913.1-201ENST00000557200 430 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 NPM1P47-201ENST00000560843 856 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 RN7SL802P-201ENST00000577858 299 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 MIR5699-201ENST00000578903 90 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC022884.3-201ENST00000579571 248 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC022726.1-201ENST00000587475 207 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC105129.3-201ENST00000605455 485 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC080013.3-201ENST00000606839 578 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 OR2AS2P-201ENST00000606902 342 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC010608.2-201ENST00000624830 470 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 CR381572.2-201ENST00000624852 397 ntBASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CLIP4Q8N3C7 AL049737.1-201ENST00000413920 1403 ntBASIC4.38□□□□□ -1.71
CLIP4Q8N3C7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms