Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RMST_9.1-201ENST00000619945 193 ntBASIC3.63□□□□□ -1.83
TNFP01375 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFP01375 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFP01375 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFP01375 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 RNU6-984P-201ENST00000363236 109 ntBASIC3.62□□□□□ -1.83
TNFP01375 SOD2P1-201ENST00000396543 562 ntBASIC3.62□□□□□ -1.83
TNFP01375 AL603766.1-201ENST00000407763 664 ntBASIC3.62□□□□□ -1.83
TNFP01375 RANP7-201ENST00000418085 644 ntBASIC3.62□□□□□ -1.83
TNFP01375 AC245054.1-201ENST00000420944 258 ntBASIC3.62□□□□□ -1.83
TNFP01375 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFP01375 TRGV7-201ENST00000427089 353 ntBASIC3.62□□□□□ -1.83
TNFP01375 ATP5HP2-201ENST00000433885 485 ntBASIC3.62□□□□□ -1.83
TNFP01375 TRBV12-2-201ENST00000489763 344 ntBASIC3.62□□□□□ -1.83
TNFP01375 HMGN1P15-201ENST00000513870 295 ntBASIC3.62□□□□□ -1.83
TNFP01375 SNORA70.17-201ENST00000516449 133 ntBASIC3.62□□□□□ -1.83
TNFP01375 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.62□□□□□ -1.83
TNFP01375 OR7E13P-201ENST00000526052 910 ntBASIC3.62□□□□□ -1.83
TNFP01375 CCNG2P1-201ENST00000549521 1000 ntBASIC3.62□□□□□ -1.83
TNFP01375 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFP01375 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.62□□□□□ -1.83
TNFP01375 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.62□□□□□ -1.83
TNFP01375 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFP01375 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.62□□□□□ -1.83
TNFP01375 AC119674.1-207ENST00000641355 633 ntBASIC3.62□□□□□ -1.83
TNFP01375 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.62□□□□□ -1.83
TNFP01375 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TNFP01375 NAMPTP1-201ENST00000440465 2514 ntBASIC3.62□□□□□ -1.83
TNFP01375 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFP01375 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
TNFP01375 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
TNFP01375 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFP01375 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFP01375 SNORA63.1-201ENST00000362493 131 ntBASIC3.61□□□□□ -1.83
TNFP01375 SNORD46.1-201ENST00000364139 104 ntBASIC3.61□□□□□ -1.83
TNFP01375 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFP01375 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.61□□□□□ -1.83
TNFP01375 ATP5F1P4-201ENST00000397288 746 ntBASIC3.61□□□□□ -1.83
TNFP01375 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.61□□□□□ -1.83
TNFP01375 AC010655.1-201ENST00000449336 292 ntBASIC3.61□□□□□ -1.83
TNFP01375 PRSS3P4-201ENST00000453323 162 ntBASIC3.61□□□□□ -1.83
TNFP01375 AC005726.1-201ENST00000494679 427 ntBASIC3.61□□□□□ -1.83
TNFP01375 SOD1P3-201ENST00000518682 454 ntBASIC3.61□□□□□ -1.83
TNFP01375 OR5B10P-201ENST00000532869 642 ntBASIC3.61□□□□□ -1.83
TNFP01375 AC008011.1-201ENST00000545989 227 ntBASIC3.61□□□□□ -1.83
TNFP01375 AC020914.6-201ENST00000594327 272 ntBASIC3.61□□□□□ -1.83
TNFP01375 AC233309.1-201ENST00000619522 751 ntBASIC3.61□□□□□ -1.83
TNFP01375 MIR4727-201ENST00000622232 55 ntBASIC3.61□□□□□ -1.83
TNFP01375 AP000553.6-201ENST00000641242 118 ntBASIC3.61□□□□□ -1.83
TNFP01375 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
TNFP01375 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
TNFP01375 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TNFP01375 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFP01375 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFP01375 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFP01375 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFP01375 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.6□□□□□ -1.83
TNFP01375 AC090337.1-201ENST00000579651 2074 ntBASIC3.6□□□□□ -1.83
TNFP01375 SNORD74.4-201ENST00000364129 80 ntBASIC3.6□□□□□ -1.83
TNFP01375 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TNFP01375 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TNFP01375 RPS3AP25-201ENST00000411660 793 ntBASIC3.6□□□□□ -1.83
TNFP01375 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.6□□□□□ -1.83
TNFP01375 NANOGP6-201ENST00000429190 847 ntBASIC3.6□□□□□ -1.83
TNFP01375 RPL21P23-201ENST00000446654 460 ntBASIC3.6□□□□□ -1.83
TNFP01375 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.6□□□□□ -1.83
TNFP01375 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
TNFP01375 OR52Y1P-201ENST00000452418 828 ntBASIC3.6□□□□□ -1.83
TNFP01375 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.6□□□□□ -1.83
TNFP01375 snoU13.22-201ENST00000459428 104 ntBASIC3.6□□□□□ -1.83
TNFP01375 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.6□□□□□ -1.83
TNFP01375 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
TNFP01375 RANP9-201ENST00000519957 271 ntBASIC3.6□□□□□ -1.83
TNFP01375 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.6□□□□□ -1.83
TNFP01375 MIR3922-201ENST00000585192 84 ntBASIC3.6□□□□□ -1.83
TNFP01375 AC068790.5-201ENST00000602741 355 ntBASIC3.6□□□□□ -1.83
TNFP01375 AC015967.1-201ENST00000619893 476 ntBASIC3.6□□□□□ -1.83
TNFP01375 AC015908.5-201ENST00000623289 343 ntBASIC3.6□□□□□ -1.83
TNFP01375 AC243312.2-201ENST00000623340 601 ntBASIC3.6□□□□□ -1.83
TNFP01375 AC244258.1-201ENST00000637553 1071 ntBASIC3.6□□□□□ -1.83
TNFP01375 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
TNFP01375 BDP1P-201ENST00000582658 1990 ntBASIC3.6□□□□□ -1.83
TNFP01375 MTND5P23-201ENST00000430812 1655 ntBASIC3.59□□□□□ -1.83
TNFP01375 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TNFP01375 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFP01375 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFP01375 RNU6-178P-201ENST00000384631 104 ntBASIC3.59□□□□□ -1.83
TNFP01375 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms