Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 RNU6-891P-201ENST00000384280 111 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 RPS27AP11-201ENST00000402798 447 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 RPL30P3-201ENST00000424262 333 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 BMS1P19-201ENST00000433925 393 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC010307.1-201ENST00000467206 836 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 UQCRHP4-201ENST00000471686 272 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC147055.1-201ENST00000509261 750 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 YPEL5P3-201ENST00000547227 352 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC091516.1-201ENST00000549191 703 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 RN7SL600P-201ENST00000581811 299 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 ABI1P1-201ENST00000603375 1120 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AC091905.1-201ENST00000624400 311 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 AP003072.4-201ENST00000624580 310 ntBASIC3.69□□□□□ -1.82
VAPAQ9P0L0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
VAPAQ9P0L0 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 MAPK10-372ENST00000641954 3413 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 HSPE1P8-201ENST00000406997 288 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 RPL26P37-201ENST00000411983 438 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 MTND4P11-201ENST00000417020 1058 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 RPL23AP38-201ENST00000423801 469 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AL356276.2-201ENST00000435919 558 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 TBCAP1-201ENST00000436520 327 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 ANP32BP2-201ENST00000454525 545 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 TRBV12-2-201ENST00000489763 344 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC231760.1-201ENST00000498002 260 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC023050.1-201ENST00000498198 304 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC092747.2-201ENST00000545069 983 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC099489.2-201ENST00000574976 260 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC055764.2-201ENST00000610089 670 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 MFSD8-220ENST00000641243 1422 ntBASIC3.68□□□□□ -1.82
VAPAQ9P0L0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VAPAQ9P0L0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 MTND4P10-201ENST00000446199 1363 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 RNA5SP498-201ENST00000411342 120 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.67□□□□□ -1.82
VAPAQ9P0L0 AL592293.2-201ENST00000422292 996 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 COX6CP15-201ENST00000426313 211 ntBASIC3.67□□□□□ -1.82
VAPAQ9P0L0 DNAJC19P7-201ENST00000428811 344 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms