Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RPS20P1-201ENST00000434853 354 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 FTH1P16-201ENST00000435241 552 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC092170.1-201ENST00000440211 356 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AL138878.2-201ENST00000440581 1241 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC011753.3-201ENST00000443436 406 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 RPL23AP43-201ENST00000446445 471 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 ARL2BPP10-201ENST00000446487 531 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC073587.1-201ENST00000447093 876 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 PTGES3P5-201ENST00000455109 434 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC099560.2-201ENST00000457554 255 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 SNORD11.1-201ENST00000459482 85 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 RPS23P1-201ENST00000491662 432 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC134050.1-201ENST00000495088 933 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 RPL21P131-201ENST00000497298 483 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 OR8I1P-201ENST00000529291 931 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC139103.1-201ENST00000534696 1030 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC008083.2-201ENST00000546707 476 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 CYP2C60P-201ENST00000566088 139 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC013468.1-201ENST00000608680 598 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 OR2BH1P-201ENST00000608850 864 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC100847.1-201ENST00000611316 481 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AL049536.1-201ENST00000625043 744 ntBASIC4.58□□□□□ -1.68
PCDH9Q9HC56 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.58□□□□□ -1.68
PCDH9Q9HC56 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 GTF2H2B-203ENST00000508065 1432 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 MFSD8-216ENST00000641147 4009 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AP000756.2-201ENST00000624168 2567 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RNU1-15P-201ENST00000353977 144 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RNA5SP28-201ENST00000363841 119 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RNU6-224P-201ENST00000384055 107 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RNU6-398P-201ENST00000384143 109 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 MIR192-201ENST00000384915 110 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 MIR659-201ENST00000384963 97 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 TAS2R15P-201ENST00000390674 928 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RPL23AP59-201ENST00000399415 461 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RPL37P18-201ENST00000411602 243 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 OR2X1P-201ENST00000421144 687 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 CETN4P-201ENST00000432407 469 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC244505.3-201ENST00000454598 187 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RPL7AP28-201ENST00000464513 571 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 OR52A4P-201ENST00000472867 958 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 MTCYBP35-201ENST00000503630 1137 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RNA5SP497-201ENST00000516081 97 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RNA5SP360-201ENST00000516555 118 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 DYNLL1P4-201ENST00000549314 266 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC068446.3-201ENST00000555285 382 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC090888.2-201ENST00000559765 1144 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC124068.1-201ENST00000563131 678 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 ATP5F1P7-201ENST00000567330 760 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 RPL26P30-202ENST00000602923 645 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC113368.1-201ENST00000603736 382 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 ELOCP35-201ENST00000604289 336 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.57□□□□□ -1.68
PCDH9Q9HC56 FRG1HP-204ENST00000617940 757 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AL355493.4-201ENST00000618530 292 ntBASIC4.57□□□□□ -1.68
PCDH9Q9HC56 AC011330.2-201ENST00000621680 635 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms