Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 RNU1-140P-201ENST00000365040 165 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 KC877373.1-201ENST00000479066 408 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 RN7SL432P-201ENST00000484057 298 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC006445.1-201ENST00000491925 405 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC010374.2-201ENST00000512933 535 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC027281.1-201ENST00000574178 758 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC015871.5-202ENST00000623252 701 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 RNA5SP247-201ENST00000411181 105 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 ZNF320-201ENST00000391781 6074 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC2.88□□□□□ -1.95
VPS13CQ709C8 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS13CQ709C8 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 RNU6-7-201ENST00000364784 107 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 RNU6-8-201ENST00000365467 107 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 AL109933.2-201ENST00000452651 260 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 Xist_exon4.1-201ENST00000615964 126 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 DYNLL1P7-201ENST00000429273 258 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 ATP5C1P1-201ENST00000441945 895 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 RPS4XP2-201ENST00000458402 793 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 U3.44-201ENST00000458938 192 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 AC103783.1-201ENST00000520506 373 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 AC008489.1-201ENST00000524271 483 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 AL512310.1-201ENST00000548639 172 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 AC023161.2-201ENST00000551218 780 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 KLKP1-201ENST00000595979 403 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 AP002512.4-202ENST00000641599 4530 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 RN7SKP222-201ENST00000410651 315 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS13CQ709C8 HMGB1P5-202ENST00000451497 985 ntBASIC2.87□□□□□ -1.95
VPS13CQ709C8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS13CQ709C8 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC099563.1-201ENST00000456086 418 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 AP003392.5-201ENST00000607857 415 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC112503.1-201ENST00000608436 391 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 LINC01355-201ENST00000566551 5444 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AL136360.1-201ENST00000503377 1900 ntBASIC2.86□□□□□ -1.95
VPS13CQ709C8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
VPS13CQ709C8 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC2.86□□□□□ -1.95
VPS13CQ709C8 AC005002.1-201ENST00000447458 540 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms