Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RN7SKP278-201ENST00000410504 342 ntBASIC4.25□□□□□ -1.73
TPM4P67936 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.25□□□□□ -1.73
TPM4P67936 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.25□□□□□ -1.73
TPM4P67936 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TPM4P67936 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.25□□□□□ -1.73
TPM4P67936 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TPM4P67936 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM4P67936 AC002075.2-201ENST00000425207 252 ntBASIC4.25□□□□□ -1.73
TPM4P67936 AC017083.1-201ENST00000428093 483 ntBASIC4.25□□□□□ -1.73
TPM4P67936 MOB1AP1-201ENST00000430903 535 ntBASIC4.25□□□□□ -1.73
TPM4P67936 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TPM4P67936 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM4P67936 RPL32P9-201ENST00000487963 407 ntBASIC4.25□□□□□ -1.73
TPM4P67936 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM4P67936 AC138701.1-201ENST00000524329 714 ntBASIC4.25□□□□□ -1.73
TPM4P67936 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.25□□□□□ -1.73
TPM4P67936 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.25□□□□□ -1.73
TPM4P67936 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.25□□□□□ -1.73
TPM4P67936 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.25□□□□□ -1.73
TPM4P67936 AL356218.2-201ENST00000605264 187 ntBASIC4.25□□□□□ -1.73
TPM4P67936 AL354760.1-201ENST00000608357 643 ntBASIC4.25□□□□□ -1.73
TPM4P67936 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.25□□□□□ -1.73
TPM4P67936 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TPM4P67936 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TPM4P67936 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TPM4P67936 MTCO1P14-201ENST00000441695 1559 ntBASIC4.24□□□□□ -1.73
TPM4P67936 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.24□□□□□ -1.73
TPM4P67936 XIAPP3-201ENST00000312918 795 ntBASIC4.24□□□□□ -1.73
TPM4P67936 RNU6-398P-201ENST00000384143 109 ntBASIC4.24□□□□□ -1.73
TPM4P67936 RNU6-167P-201ENST00000384292 106 ntBASIC4.24□□□□□ -1.73
TPM4P67936 RPL31P52-201ENST00000407532 367 ntBASIC4.24□□□□□ -1.73
TPM4P67936 RN7SKP33-201ENST00000410942 340 ntBASIC4.24□□□□□ -1.73
TPM4P67936 SNORA57.3-201ENST00000411095 141 ntBASIC4.24□□□□□ -1.73
TPM4P67936 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM4P67936 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.24□□□□□ -1.73
TPM4P67936 AL691449.1-201ENST00000426570 421 ntBASIC4.24□□□□□ -1.73
TPM4P67936 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
TPM4P67936 RPL21P71-201ENST00000465598 459 ntBASIC4.24□□□□□ -1.73
TPM4P67936 RPS3AP6-201ENST00000484430 795 ntBASIC4.24□□□□□ -1.73
TPM4P67936 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM4P67936 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.24□□□□□ -1.73
TPM4P67936 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TPM4P67936 SNORA70.14-201ENST00000516205 110 ntBASIC4.24□□□□□ -1.73
TPM4P67936 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM4P67936 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM4P67936 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM4P67936 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.24□□□□□ -1.73
TPM4P67936 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.24□□□□□ -1.73
TPM4P67936 KLKP1-201ENST00000595979 403 ntBASIC4.24□□□□□ -1.73
TPM4P67936 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.24□□□□□ -1.73
TPM4P67936 AC010857.1-201ENST00000606398 594 ntBASIC4.24□□□□□ -1.73
TPM4P67936 SNORA35B-201ENST00000607417 129 ntBASIC4.24□□□□□ -1.73
TPM4P67936 AC053481.2-202ENST00000582394 1500 ntBASIC4.24□□□□□ -1.73
TPM4P67936 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TPM4P67936 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TPM4P67936 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TPM4P67936 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TPM4P67936 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TPM4P67936 Z97055.1-201ENST00000419730 712 ntBASIC4.23□□□□□ -1.73
TPM4P67936 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.23□□□□□ -1.73
TPM4P67936 RPS27AP7-201ENST00000422792 455 ntBASIC4.23□□□□□ -1.73
TPM4P67936 MRPL50P1-201ENST00000431951 384 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AC245517.2-201ENST00000442890 346 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AC006480.1-201ENST00000449887 378 ntBASIC4.23□□□□□ -1.73
TPM4P67936 RNU7-170P-201ENST00000459303 61 ntBASIC4.23□□□□□ -1.73
TPM4P67936 RPL35AP28-201ENST00000459730 331 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AC010683.1-201ENST00000473673 378 ntBASIC4.23□□□□□ -1.73
TPM4P67936 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.23□□□□□ -1.73
TPM4P67936 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 RNA5SP164-201ENST00000516533 110 ntBASIC4.23□□□□□ -1.73
TPM4P67936 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.23□□□□□ -1.73
TPM4P67936 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TPM4P67936 CYP2C60P-201ENST00000566088 139 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.23□□□□□ -1.73
TPM4P67936 MIR4458-201ENST00000578872 75 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AC083899.3-201ENST00000603413 594 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AL163642.2-201ENST00000604722 1019 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AC114781.5-201ENST00000615297 108 ntBASIC4.23□□□□□ -1.73
TPM4P67936 AL121890.3-201ENST00000618494 516 ntBASIC4.23□□□□□ -1.73
TPM4P67936 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM4P67936 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM4P67936 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM4P67936 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.23□□□□□ -1.73
TPM4P67936 AC139713.2-214ENST00000642059 1811 ntBASIC4.23□□□□□ -1.73
TPM4P67936 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM4P67936 CASC19-261ENST00000641853 1638 ntBASIC4.22□□□□□ -1.73
TPM4P67936 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
TPM4P67936 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM4P67936 RN7SKP222-201ENST00000410651 315 ntBASIC4.22□□□□□ -1.73
TPM4P67936 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.22□□□□□ -1.73
TPM4P67936 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.22□□□□□ -1.73
TPM4P67936 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.22□□□□□ -1.73
TPM4P67936 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TPM4P67936 MTCYBP7-201ENST00000419540 1134 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms