Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.83□□□□□ -1.8
BRCA2P51587 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.83□□□□□ -1.8
BRCA2P51587 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.83□□□□□ -1.8
BRCA2P51587 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BRCA2P51587 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BRCA2P51587 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCA2P51587 AC003685.2-201ENST00000422795 395 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCA2P51587 BX119904.3-201ENST00000428194 957 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 FAM172BP-201ENST00000487497 1089 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCA2P51587 AL133247.2-201ENST00000603236 482 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.82□□□□□ -1.8
BRCA2P51587 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BRCA2P51587 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCA2P51587 AC104058.1-201ENST00000448028 297 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.82□□□□□ -1.8
BRCA2P51587 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
BRCA2P51587 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.82□□□□□ -1.8
BRCA2P51587 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
BRCA2P51587 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRCA2P51587 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BRCA2P51587 PRNCR1-201ENST00000635449 12727 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
BRCA2P51587 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BRCA2P51587 MIR504-201ENST00000385065 83 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 VDAC2P1-201ENST00000399358 958 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.82□□□□□ -1.8
BRCA2P51587 ATP5C1P1-201ENST00000441945 895 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 AL135938.1-201ENST00000443141 297 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 PSMC1P13-201ENST00000458195 985 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.82□□□□□ -1.8
BRCA2P51587 AC100793.4-201ENST00000613683 429 ntBASIC3.82□□□□□ -1.8
BRCA2P51587 ZNF826P-207ENST00000622273 1910 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 HYDIN2-203ENST00000614586 13885 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 AP000916.1-201ENST00000533869 835 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.81□□□□□ -1.8
BRCA2P51587 MIR4524B-201ENST00000581569 115 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.81□□□□□ -1.8
BRCA2P51587 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 AC099563.1-201ENST00000456086 418 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.81□□□□□ -1.8
BRCA2P51587 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.81□□□□□ -1.8
BRCA2P51587 AC009159.1-201ENST00000618386 642 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 AC021755.1-201ENST00000559747 1447 ntBASIC3.81□□□□□ -1.8
BRCA2P51587 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
BRCA2P51587 DENND2C-201ENST00000393274 6163 ntTSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
BRCA2P51587 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 NUP35P1-201ENST00000422734 947 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.8□□□□□ -1.8
BRCA2P51587 AC027281.1-201ENST00000574178 758 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.8□□□□□ -1.8
BRCA2P51587 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.8□□□□□ -1.8
BRCA2P51587 AC009313.2-201ENST00000417893 1941 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
BRCA2P51587 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.8□□□□□ -1.8
BRCA2P51587 Z93242.1-201ENST00000427102 353 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.8□□□□□ -1.8
BRCA2P51587 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.8□□□□□ -1.8
BRCA2P51587 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.8□□□□□ -1.8
BRCA2P51587 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.8□□□□□ -1.8
BRCA2P51587 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.8□□□□□ -1.8
BRCA2P51587 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.8□□□□□ -1.8
BRCA2P51587 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.8□□□□□ -1.8
BRCA2P51587 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 RNU1-15P-201ENST00000353977 144 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
BRCA2P51587 AL031679.1-201ENST00000400616 525 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 AC004448.2-201ENST00000422360 586 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 AC021678.1-201ENST00000505195 936 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 OR4A12P-201ENST00000530847 918 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.8□□□□□ -1.8
BRCA2P51587 AC090286.3-201ENST00000573133 187 ntBASIC3.8□□□□□ -1.8
BRCA2P51587 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.8□□□□□ -1.8
BRCA2P51587 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms