Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.12□□□□□ -1.75
XRCC1P18887 AL133477.1-201ENST00000457472 514 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 RNA5SP246-201ENST00000458909 119 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AC089999.1-201ENST00000460336 374 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 RPL7P48-201ENST00000461513 746 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 RPL23AP12-201ENST00000467573 473 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 RPL23AP71-201ENST00000470966 469 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AC104164.2-201ENST00000496953 495 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AC025459.1-201ENST00000504072 156 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.12□□□□□ -1.75
XRCC1P18887 MIR2116-201ENST00000517221 80 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AC103833.1-201ENST00000517442 172 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.12□□□□□ -1.75
XRCC1P18887 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.12□□□□□ -1.75
XRCC1P18887 NPM1P47-201ENST00000560843 856 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.12□□□□□ -1.75
XRCC1P18887 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC4.12□□□□□ -1.75
XRCC1P18887 MIR3160-1-201ENST00000577972 85 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 PSMA6P4-201ENST00000603247 718 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AL591034.3-201ENST00000605511 685 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AC004775.1-201ENST00000607389 753 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 AP004607.9-201ENST00000618202 316 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 AC139769.3-201ENST00000618383 175 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.12□□□□□ -1.75
XRCC1P18887 AL359715.5-201ENST00000623431 443 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
XRCC1P18887 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.12□□□□□ -1.75
XRCC1P18887 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
XRCC1P18887 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.12□□□□□ -1.75
XRCC1P18887 OR11H5P-202ENST00000641612 1325 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
XRCC1P18887 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.12□□□□□ -1.75
XRCC1P18887 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
XRCC1P18887 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
XRCC1P18887 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
XRCC1P18887 TAF9BP2-201ENST00000400856 499 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AL356057.1-202ENST00000402263 756 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 ZNF603P-201ENST00000405613 487 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AL603766.1-201ENST00000407763 664 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AP000357.1-201ENST00000409926 1165 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 RN7SKP33-201ENST00000410942 340 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 RAC1P3-201ENST00000416129 580 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 MRPL50P1-201ENST00000431951 384 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 AL513321.1-201ENST00000441175 761 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 AL161747.1-201ENST00000480068 358 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AC005912.1-201ENST00000495392 255 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 BNIP3P41-201ENST00000503774 571 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 RN7SKP141-201ENST00000516167 338 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 DEFB109D-201ENST00000529497 240 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.11□□□□□ -1.75
XRCC1P18887 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 AL109741.3-201ENST00000561748 592 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.11□□□□□ -1.75
XRCC1P18887 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.11□□□□□ -1.75
XRCC1P18887 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 AC010857.1-201ENST00000606398 594 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AL645927.2-201ENST00000618350 349 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 AC112484.5-201ENST00000624189 228 ntBASIC4.11□□□□□ -1.75
XRCC1P18887 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.11□□□□□ -1.75
XRCC1P18887 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
XRCC1P18887 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
XRCC1P18887 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
XRCC1P18887 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.1□□□□□ -1.75
XRCC1P18887 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
XRCC1P18887 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.1□□□□□ -1.75
XRCC1P18887 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms