Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.17□□□□□ -1.9
CTSDP07339 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.17□□□□□ -1.9
CTSDP07339 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.17□□□□□ -1.9
CTSDP07339 AC004801.2-202ENST00000463559 283 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.17□□□□□ -1.9
CTSDP07339 AC108941.1-201ENST00000502853 530 ntBASIC3.17□□□□□ -1.9
CTSDP07339 ARL2BPP6-201ENST00000512757 439 ntBASIC3.17□□□□□ -1.9
CTSDP07339 RNA5SP179-201ENST00000517284 121 ntBASIC3.17□□□□□ -1.9
CTSDP07339 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 HIGD1AP5-201ENST00000529959 259 ntBASIC3.17□□□□□ -1.9
CTSDP07339 PDCL2P2-201ENST00000533651 189 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.17□□□□□ -1.9
CTSDP07339 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.17□□□□□ -1.9
CTSDP07339 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.17□□□□□ -1.9
CTSDP07339 MIR5047-201ENST00000579212 100 ntBASIC3.17□□□□□ -1.9
CTSDP07339 MIR3939-201ENST00000582614 106 ntBASIC3.17□□□□□ -1.9
CTSDP07339 MIR3138-201ENST00000585238 82 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.17□□□□□ -1.9
CTSDP07339 AC006116.5-201ENST00000591936 559 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.17□□□□□ -1.9
CTSDP07339 BMS1P7-201ENST00000602440 1052 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC091167.4-201ENST00000605079 184 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AL135786.2-201ENST00000608422 615 ntBASIC3.17□□□□□ -1.9
CTSDP07339 MLECP1-201ENST00000615893 709 ntBASIC3.17□□□□□ -1.9
CTSDP07339 MIR6758-201ENST00000620653 63 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC092628.2-201ENST00000622492 339 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC010608.2-201ENST00000624830 470 ntBASIC3.17□□□□□ -1.9
CTSDP07339 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.17□□□□□ -1.9
CTSDP07339 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.17□□□□□ -1.9
CTSDP07339 AC009452.1-201ENST00000640823 606 ntBASIC3.17□□□□□ -1.9
CTSDP07339 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CTSDP07339 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.17□□□□□ -1.9
CTSDP07339 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CTSDP07339 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.16□□□□□ -1.9
CTSDP07339 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CTSDP07339 AC114546.3-201ENST00000623582 1734 ntBASIC3.16□□□□□ -1.9
CTSDP07339 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 LARP1BP1-201ENST00000506036 1359 ntBASIC3.16□□□□□ -1.9
CTSDP07339 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.16□□□□□ -1.9
CTSDP07339 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.16□□□□□ -1.9
CTSDP07339 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
CTSDP07339 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 RPL32P3-201ENST00000359025 275 ntBASIC3.16□□□□□ -1.9
CTSDP07339 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 MIR184-201ENST00000384962 84 ntBASIC3.16□□□□□ -1.9
CTSDP07339 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 Y_RNA.625-201ENST00000411256 107 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.16□□□□□ -1.9
CTSDP07339 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.16□□□□□ -1.9
CTSDP07339 C4BPAP2-201ENST00000428434 478 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.16□□□□□ -1.9
CTSDP07339 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.16□□□□□ -1.9
CTSDP07339 RAB9AP5-201ENST00000437794 597 ntBASIC3.16□□□□□ -1.9
CTSDP07339 RAB9AP2-201ENST00000443911 597 ntBASIC3.16□□□□□ -1.9
CTSDP07339 H2AFZP6-201ENST00000444403 394 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.16□□□□□ -1.9
CTSDP07339 NUTF2P3-201ENST00000448540 384 ntBASIC3.16□□□□□ -1.9
CTSDP07339 MTND6P32-201ENST00000457611 483 ntBASIC3.16□□□□□ -1.9
CTSDP07339 NPM1P17-201ENST00000479221 602 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AL049830.2-201ENST00000480072 201 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AC091167.1-201ENST00000492017 396 ntBASIC3.16□□□□□ -1.9
CTSDP07339 RPL23AP73-201ENST00000492507 471 ntBASIC3.16□□□□□ -1.9
CTSDP07339 RPS27AP13-201ENST00000498403 237 ntBASIC3.16□□□□□ -1.9
CTSDP07339 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 SNORA31.9-201ENST00000516429 84 ntBASIC3.16□□□□□ -1.9
CTSDP07339 RN7SKP60-201ENST00000516985 239 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AC138701.1-201ENST00000524329 714 ntBASIC3.16□□□□□ -1.9
CTSDP07339 YPEL5P3-201ENST00000547227 352 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AC018552.3-201ENST00000567416 561 ntBASIC3.16□□□□□ -1.9
CTSDP07339 MIR4425-201ENST00000580572 84 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC3.16□□□□□ -1.9
CTSDP07339 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.16□□□□□ -1.9
CTSDP07339 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.16□□□□□ -1.9
CTSDP07339 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.16□□□□□ -1.9
CTSDP07339 AC012531.5-201ENST00000611375 151 ntBASIC3.16□□□□□ -1.9
CTSDP07339 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CTSDP07339 AC000123.2-201ENST00000623124 461 ntBASIC3.16□□□□□ -1.9
CTSDP07339 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.16□□□□□ -1.9
CTSDP07339 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CTSDP07339 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
CTSDP07339 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CTSDP07339 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CTSDP07339 BX005019.1-201ENST00000561881 1810 ntBASIC3.15□□□□□ -1.91
CTSDP07339 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.15□□□□□ -1.91
CTSDP07339 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.15□□□□□ -1.91
CTSDP07339 RN7SKP285-201ENST00000410137 318 ntBASIC3.15□□□□□ -1.91
CTSDP07339 AC098592.2-201ENST00000413158 265 ntBASIC3.15□□□□□ -1.91
CTSDP07339 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.15□□□□□ -1.91
CTSDP07339 MTND4LP13-201ENST00000425022 298 ntBASIC3.15□□□□□ -1.91
CTSDP07339 HMGB1P32-201ENST00000425971 565 ntBASIC3.15□□□□□ -1.91
CTSDP07339 AC006989.1-201ENST00000427212 131 ntBASIC3.15□□□□□ -1.91
CTSDP07339 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CTSDP07339 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms