Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 RPS29P31-201ENST00000446147 164 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 EIF4A1P11-201ENST00000451239 222 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AC105137.1-201ENST00000484355 562 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AC092045.1-201ENST00000495716 1231 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 IGHV3-32-201ENST00000519182 355 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 SUMO2P20-201ENST00000520803 283 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AC007424.1-203ENST00000554613 687 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AC018552.3-201ENST00000567416 561 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 VN1R85P-201ENST00000601587 426 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 BMS1P7-201ENST00000602440 1052 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 ZYXP1-201ENST00000617638 118 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AL139254.3-201ENST00000641097 674 ntBASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC112Q8NEF3 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 OR13C3-201ENST00000374781 1108 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 MTND2P2-201ENST00000434633 945 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 FCF1P7-201ENST00000451185 558 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 RPL7P19-201ENST00000469948 618 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 TRBV12-2-201ENST00000489763 344 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 TVP23BP1-201ENST00000557500 617 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 AC074050.1-201ENST00000563247 211 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 AC024941.1-201ENST00000612250 334 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 AL445567.2-201ENST00000618935 498 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 MIR3653-201ENST00000625572 110 ntBASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC112Q8NEF3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 MIR383-201ENST00000362257 73 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 RN7SKP285-201ENST00000410137 318 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 RWDD4P2-201ENST00000426392 563 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AL158073.1-201ENST00000426848 1104 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC022022.1-201ENST00000430304 178 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 COX6B1P7-201ENST00000430845 235 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 BTF3P10-201ENST00000433415 495 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC005229.2-201ENST00000456995 399 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 RWDD4P1-201ENST00000488019 565 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC091167.1-201ENST00000492017 396 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 RN7SL604P-201ENST00000492589 296 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AP003730.1-201ENST00000524605 285 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 RMST_8.1-201ENST00000610287 165 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 Z73965.1-201ENST00000623412 2297 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 SPATA2P1-201ENST00000431223 2055 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 RIOK3P1-201ENST00000418778 1528 ntBASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
CCDC112Q8NEF3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 RNU1-64P-201ENST00000365443 163 ntBASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 RN7SKP27-201ENST00000410684 333 ntBASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 KCTD10P1-201ENST00000434203 625 ntBASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 USP9YP5-201ENST00000511770 630 ntBASIC4.25□□□□□ -1.73
CCDC112Q8NEF3 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms