Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC234771.5-201ENST00000600161 514 ntBASIC3.52□□□□□ -1.85
ACTBP60709 AL354984.3-201ENST00000604803 325 ntBASIC3.52□□□□□ -1.85
ACTBP60709 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.52□□□□□ -1.85
ACTBP60709 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.52□□□□□ -1.85
ACTBP60709 uc_338.13-201ENST00000618243 179 ntBASIC3.52□□□□□ -1.85
ACTBP60709 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.52□□□□□ -1.85
ACTBP60709 AC140479.6-201ENST00000633535 357 ntBASIC3.52□□□□□ -1.85
ACTBP60709 MIR4278-201ENST00000636094 69 ntBASIC3.52□□□□□ -1.85
ACTBP60709 AC008013.2-202ENST00000637965 364 ntBASIC3.52□□□□□ -1.85
ACTBP60709 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
ACTBP60709 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ACTBP60709 ASNSP1-204ENST00000641977 1664 ntBASIC3.52□□□□□ -1.85
ACTBP60709 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.52□□□□□ -1.85
ACTBP60709 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
ACTBP60709 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
ACTBP60709 GABPAP-201ENST00000419271 1356 ntBASIC3.51□□□□□ -1.85
ACTBP60709 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.51□□□□□ -1.85
ACTBP60709 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
ACTBP60709 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
ACTBP60709 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
ACTBP60709 AC008033.1-201ENST00000216407 1162 ntBASIC3.51□□□□□ -1.85
ACTBP60709 OR5P1P-201ENST00000299512 925 ntBASIC3.51□□□□□ -1.85
ACTBP60709 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.51□□□□□ -1.85
ACTBP60709 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 RNU6-532P-201ENST00000384318 107 ntBASIC3.51□□□□□ -1.85
ACTBP60709 HMGN2P8-201ENST00000391458 268 ntBASIC3.51□□□□□ -1.85
ACTBP60709 AC240504.1-201ENST00000395709 845 ntBASIC3.51□□□□□ -1.85
ACTBP60709 MIR1251-201ENST00000408552 70 ntBASIC3.51□□□□□ -1.85
ACTBP60709 CNOT7P1-201ENST00000429006 852 ntBASIC3.51□□□□□ -1.85
ACTBP60709 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.51□□□□□ -1.85
ACTBP60709 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.51□□□□□ -1.85
ACTBP60709 FTH1P16-201ENST00000435241 552 ntBASIC3.51□□□□□ -1.85
ACTBP60709 CYCSP43-201ENST00000438233 310 ntBASIC3.51□□□□□ -1.85
ACTBP60709 RPS7P5-201ENST00000441482 581 ntBASIC3.51□□□□□ -1.85
ACTBP60709 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 RN7SL93P-201ENST00000463035 293 ntBASIC3.51□□□□□ -1.85
ACTBP60709 AC006463.2-201ENST00000473326 348 ntBASIC3.51□□□□□ -1.85
ACTBP60709 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.51□□□□□ -1.85
ACTBP60709 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.51□□□□□ -1.85
ACTBP60709 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 AC106785.3-201ENST00000564064 847 ntBASIC3.51□□□□□ -1.85
ACTBP60709 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
ACTBP60709 AC018754.1-201ENST00000607486 925 ntBASIC3.51□□□□□ -1.85
ACTBP60709 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.51□□□□□ -1.85
ACTBP60709 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.51□□□□□ -1.85
ACTBP60709 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.51□□□□□ -1.85
ACTBP60709 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.51□□□□□ -1.85
ACTBP60709 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.51□□□□□ -1.85
ACTBP60709 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ACTBP60709 UBE3AP2-201ENST00000429033 2259 ntBASIC3.5□□□□□ -1.85
ACTBP60709 SEPT7P7-201ENST00000420492 1301 ntBASIC3.5□□□□□ -1.85
ACTBP60709 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ACTBP60709 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ACTBP60709 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.5□□□□□ -1.85
ACTBP60709 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ACTBP60709 RNU1-18P-201ENST00000363062 164 ntBASIC3.5□□□□□ -1.85
ACTBP60709 RNA5SP443-201ENST00000363083 132 ntBASIC3.5□□□□□ -1.85
ACTBP60709 RNU6-666P-201ENST00000363499 107 ntBASIC3.5□□□□□ -1.85
ACTBP60709 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
ACTBP60709 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
ACTBP60709 SNORA11F-201ENST00000408237 128 ntBASIC3.5□□□□□ -1.85
ACTBP60709 RNA5SP498-201ENST00000411342 120 ntBASIC3.5□□□□□ -1.85
ACTBP60709 RHEBP3-201ENST00000411920 351 ntBASIC3.5□□□□□ -1.85
ACTBP60709 AC010740.1-201ENST00000417035 684 ntBASIC3.5□□□□□ -1.85
ACTBP60709 AL139095.3-201ENST00000419672 1203 ntBASIC3.5□□□□□ -1.85
ACTBP60709 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.5□□□□□ -1.85
ACTBP60709 PHBP16-201ENST00000446318 950 ntBASIC3.5□□□□□ -1.85
ACTBP60709 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ACTBP60709 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.5□□□□□ -1.85
ACTBP60709 DNAJC19P1-201ENST00000455312 319 ntBASIC3.5□□□□□ -1.85
ACTBP60709 snoU13.1-201ENST00000459157 104 ntBASIC3.5□□□□□ -1.85
ACTBP60709 RN7SL330P-201ENST00000469709 307 ntBASIC3.5□□□□□ -1.85
ACTBP60709 RN7SL738P-201ENST00000470264 297 ntBASIC3.5□□□□□ -1.85
ACTBP60709 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.5□□□□□ -1.85
ACTBP60709 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.5□□□□□ -1.85
ACTBP60709 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.5□□□□□ -1.85
ACTBP60709 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.5□□□□□ -1.85
ACTBP60709 AC113398.2-201ENST00000507630 558 ntBASIC3.5□□□□□ -1.85
ACTBP60709 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC3.5□□□□□ -1.85
ACTBP60709 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.5□□□□□ -1.85
ACTBP60709 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.5□□□□□ -1.85
ACTBP60709 OR4U1P-201ENST00000554958 912 ntBASIC3.5□□□□□ -1.85
ACTBP60709 AL133457.1-201ENST00000564251 987 ntBASIC3.5□□□□□ -1.85
ACTBP60709 MIR4715-201ENST00000584117 79 ntBASIC3.5□□□□□ -1.85
ACTBP60709 AC090948.1-201ENST00000607464 549 ntBASIC3.5□□□□□ -1.85
ACTBP60709 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC3.5□□□□□ -1.85
ACTBP60709 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms