Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 AL133243.3-201ENST00000617415 3004 ntBASIC4.2□□□□□ -1.74
CDH11P55287 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH11P55287 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDH11P55287 RNA5SP505-201ENST00000364748 108 ntBASIC4.2□□□□□ -1.74
CDH11P55287 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CDH11P55287 RNU6-906P-201ENST00000384700 70 ntBASIC4.2□□□□□ -1.74
CDH11P55287 RNU1-82P-201ENST00000390851 165 ntBASIC4.2□□□□□ -1.74
CDH11P55287 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 AC114755.2-201ENST00000413520 361 ntBASIC4.2□□□□□ -1.74
CDH11P55287 BTF3P8-201ENST00000414577 526 ntBASIC4.2□□□□□ -1.74
CDH11P55287 MTCYBP15-201ENST00000433123 1127 ntBASIC4.2□□□□□ -1.74
CDH11P55287 AC002542.1-201ENST00000440683 193 ntBASIC4.2□□□□□ -1.74
CDH11P55287 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH11P55287 FGF7P3-201ENST00000454645 303 ntBASIC4.2□□□□□ -1.74
CDH11P55287 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH11P55287 TRBV8-2-201ENST00000475637 270 ntBASIC4.2□□□□□ -1.74
CDH11P55287 AC011005.3-201ENST00000491624 395 ntBASIC4.2□□□□□ -1.74
CDH11P55287 RPL23AP72-201ENST00000492447 435 ntBASIC4.2□□□□□ -1.74
CDH11P55287 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH11P55287 RNA5SP446-201ENST00000515955 82 ntBASIC4.2□□□□□ -1.74
CDH11P55287 RNU1-6P-201ENST00000516290 144 ntBASIC4.2□□□□□ -1.74
CDH11P55287 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH11P55287 EEF1A1P37-201ENST00000522748 715 ntBASIC4.2□□□□□ -1.74
CDH11P55287 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.2□□□□□ -1.74
CDH11P55287 OR5AN2P-201ENST00000534535 896 ntBASIC4.2□□□□□ -1.74
CDH11P55287 AP006289.1-201ENST00000538089 277 ntBASIC4.2□□□□□ -1.74
CDH11P55287 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH11P55287 AC022726.1-201ENST00000587475 207 ntBASIC4.2□□□□□ -1.74
CDH11P55287 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.2□□□□□ -1.74
CDH11P55287 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 AC140725.3-201ENST00000616193 880 ntBASIC4.2□□□□□ -1.74
CDH11P55287 AL158196.1-201ENST00000616786 434 ntBASIC4.2□□□□□ -1.74
CDH11P55287 AC010975.3-201ENST00000618727 978 ntBASIC4.2□□□□□ -1.74
CDH11P55287 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH11P55287 AC097520.1-201ENST00000624435 385 ntBASIC4.2□□□□□ -1.74
CDH11P55287 AC015726.3-201ENST00000624501 418 ntBASIC4.2□□□□□ -1.74
CDH11P55287 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CDH11P55287 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
CDH11P55287 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH11P55287 MFSD8-220ENST00000641243 1422 ntBASIC4.2□□□□□ -1.74
CDH11P55287 ZFRP1-201ENST00000457579 2970 ntBASIC4.2□□□□□ -1.74
CDH11P55287 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH11P55287 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.19□□□□□ -1.74
CDH11P55287 NCLP2-201ENST00000416078 1462 ntBASIC4.19□□□□□ -1.74
CDH11P55287 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH11P55287 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH11P55287 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.19□□□□□ -1.74
CDH11P55287 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 Y_RNA.472-201ENST00000384322 102 ntBASIC4.19□□□□□ -1.74
CDH11P55287 U3.30-201ENST00000391308 210 ntBASIC4.19□□□□□ -1.74
CDH11P55287 FAR2P2-201ENST00000413041 594 ntBASIC4.19□□□□□ -1.74
CDH11P55287 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 AL645608.4-201ENST00000423619 154 ntBASIC4.19□□□□□ -1.74
CDH11P55287 FAR2P4-202ENST00000425399 584 ntBASIC4.19□□□□□ -1.74
CDH11P55287 RPL21P91-201ENST00000429231 479 ntBASIC4.19□□□□□ -1.74
CDH11P55287 OR2B7P-201ENST00000429302 934 ntBASIC4.19□□□□□ -1.74
CDH11P55287 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 NRBF2P3-201ENST00000432731 865 ntBASIC4.19□□□□□ -1.74
CDH11P55287 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH11P55287 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH11P55287 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH11P55287 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH11P55287 ZNF886P-201ENST00000450781 723 ntBASIC4.19□□□□□ -1.74
CDH11P55287 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.19□□□□□ -1.74
CDH11P55287 AC090142.1-201ENST00000465776 462 ntBASIC4.19□□□□□ -1.74
CDH11P55287 METTL15P1-201ENST00000481421 1045 ntBASIC4.19□□□□□ -1.74
CDH11P55287 AC023050.1-201ENST00000498198 304 ntBASIC4.19□□□□□ -1.74
CDH11P55287 AC104108.1-201ENST00000509930 412 ntBASIC4.19□□□□□ -1.74
CDH11P55287 RAB9BP1-201ENST00000519581 626 ntBASIC4.19□□□□□ -1.74
CDH11P55287 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH11P55287 LRRC6P1-201ENST00000532188 885 ntBASIC4.19□□□□□ -1.74
CDH11P55287 AC100770.1-201ENST00000532310 322 ntBASIC4.19□□□□□ -1.74
CDH11P55287 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH11P55287 AC068714.1-201ENST00000559623 800 ntBASIC4.19□□□□□ -1.74
CDH11P55287 SULT1C2P2-201ENST00000562517 294 ntBASIC4.19□□□□□ -1.74
CDH11P55287 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH11P55287 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH11P55287 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH11P55287 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH11P55287 AC010200.2-201ENST00000605098 235 ntBASIC4.19□□□□□ -1.74
CDH11P55287 FAM27B-201ENST00000610601 213 ntBASIC4.19□□□□□ -1.74
CDH11P55287 MIR6780A-201ENST00000615089 68 ntBASIC4.19□□□□□ -1.74
CDH11P55287 U6.48-201ENST00000618523 106 ntBASIC4.19□□□□□ -1.74
CDH11P55287 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms