Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 GTF2IP8-201ENST00000560687 584 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AC008638.3-201ENST00000603341 463 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AC128687.2-201ENST00000609657 566 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AC138627.1-204ENST00000641894 765 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 OR5AC4P-202ENST00000642086 985 ntBASIC4.75□□□□□ -1.65
SCN11AQ9UI33 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCN11AQ9UI33 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.74□□□□□ -1.65
SCN11AQ9UI33 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 SUMO2P20-201ENST00000520803 283 ntBASIC4.74□□□□□ -1.65
SCN11AQ9UI33 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 AC092354.2-201ENST00000607786 514 ntBASIC4.74□□□□□ -1.65
SCN11AQ9UI33 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 AL035425.3-201ENST00000564206 4996 ntBASIC4.74□□□□□ -1.65
SCN11AQ9UI33 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 MUC2-202ENST00000613187 4845 ntBASIC4.74□□□□□ -1.65
SCN11AQ9UI33 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCN11AQ9UI33 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 MIR513A2-201ENST00000385249 127 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 STMN1P2-201ENST00000508435 439 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 AC098824.1-201ENST00000453565 980 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 PRELID3BP6-201ENST00000503839 571 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 AC026784.1-201ENST00000507986 352 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 AL669942.2-201ENST00000620352 697 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 MTCO1P12-201ENST00000414273 1543 ntBASIC4.73□□□□□ -1.65
SCN11AQ9UI33 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SCN11AQ9UI33 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 RPL21P110-201ENST00000433345 446 ntBASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AC092641.1-201ENST00000440229 772 ntBASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AC006480.1-201ENST00000449887 378 ntBASIC4.72□□□□□ -1.65
SCN11AQ9UI33 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.72□□□□□ -1.65
SCN11AQ9UI33 RPL21P10-201ENST00000463521 490 ntBASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AC022795.1-201ENST00000473808 480 ntBASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 AC091905.1-201ENST00000624400 311 ntBASIC4.72□□□□□ -1.65
SCN11AQ9UI33 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCN11AQ9UI33 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
SCN11AQ9UI33 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
SCN11AQ9UI33 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 HSFY4P-201ENST00000415994 1181 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 SDCBPP2-201ENST00000424643 885 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AC017083.1-201ENST00000428093 483 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 RPL5P30-201ENST00000465511 891 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AC093663.1-201ENST00000497190 394 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AC092435.4-201ENST00000623012 4159 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 BDP1P-201ENST00000582658 1990 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 SMG1P4-204ENST00000523028 4131 ntBASIC4.71□□□□□ -1.66
SCN11AQ9UI33 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SCN11AQ9UI33 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms