Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORA51-201ENST00000606420 132 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AL121772.2-201ENST00000614331 297 ntBASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RPAP1Q9BWH6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 RNA5SP502-201ENST00000362694 119 ntBASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 Y_RNA.333-201ENST00000365274 102 ntBASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 AF228730.2-201ENST00000438784 848 ntBASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 RPL23AP71-201ENST00000470966 469 ntBASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 AL139099.1-201ENST00000497398 403 ntBASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 TRMT10BP1-201ENST00000519377 943 ntBASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
RPAP1Q9BWH6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 OR13C3-201ENST00000374781 1108 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AC069157.1-201ENST00000421749 137 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AL157884.3-201ENST00000448273 1184 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 RPS20P21-201ENST00000466859 343 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 GAPDHP36-201ENST00000480688 918 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 OR9N1P-201ENST00000491296 333 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 PAICSP4-201ENST00000517543 1253 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AC026403.1-201ENST00000518938 295 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AC244100.1-202ENST00000621554 382 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 AL359715.5-201ENST00000623431 443 ntBASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
RPAP1Q9BWH6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 OR4A15-201ENST00000314706 1035 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 RNU6-697P-201ENST00000363348 107 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 SNORD35B-201ENST00000363660 87 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 SNORA11C-201ENST00000408532 129 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC092647.1-201ENST00000420654 287 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AL391219.1-201ENST00000422570 483 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC083863.1-201ENST00000438811 231 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 OR9M1P-201ENST00000459641 921 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 SEPT7P6-201ENST00000469999 1143 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 SYT14P1-201ENST00000481459 721 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 RPS4XP15-201ENST00000489210 795 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 RPL7P24-201ENST00000493052 752 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 DSTNP2-201ENST00000504533 515 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC107918.3-201ENST00000533272 382 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 CYCSP30-201ENST00000546447 172 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 CCNG2P1-201ENST00000549521 1000 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AL451044.1-201ENST00000604867 238 ntBASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
RPAP1Q9BWH6 FAM91A3P-201ENST00000456826 2544 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms