Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC233263.6-201ENST00000631132 1963 ntBASIC6.1□□□□□ -1.43
IFT140Q96RY7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
IFT140Q96RY7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
IFT140Q96RY7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
IFT140Q96RY7 HSPE1P27-201ENST00000430808 296 ntBASIC6.09□□□□□ -1.43
IFT140Q96RY7 AC080014.1-201ENST00000496877 1201 ntBASIC6.09□□□□□ -1.43
IFT140Q96RY7 AC010653.1-201ENST00000571108 881 ntBASIC6.09□□□□□ -1.43
IFT140Q96RY7 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.09□□□□□ -1.43
IFT140Q96RY7 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.09□□□□□ -1.43
IFT140Q96RY7 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
IFT140Q96RY7 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
IFT140Q96RY7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
IFT140Q96RY7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
IFT140Q96RY7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
IFT140Q96RY7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.09□□□□□ -1.43
IFT140Q96RY7 AL672167.1-205ENST00000641112 3080 ntBASIC6.09□□□□□ -1.43
IFT140Q96RY7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC6.09□□□□□ -1.43
IFT140Q96RY7 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
IFT140Q96RY7 AC007685.1-201ENST00000329806 452 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 ANKRD36P1-201ENST00000344424 659 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.44
IFT140Q96RY7 AL359643.1-201ENST00000404109 423 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC6.09□□□□□ -1.44
IFT140Q96RY7 PSMC1P13-201ENST00000458195 985 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 HIGD1AP3-201ENST00000515857 278 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC6.09□□□□□ -1.44
IFT140Q96RY7 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC6.09□□□□□ -1.44
IFT140Q96RY7 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
IFT140Q96RY7 RPL21P7-201ENST00000557463 483 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 AC124312.4-201ENST00000605533 310 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 AL713922.2-201ENST00000619384 716 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 AC022106.2-201ENST00000620114 757 ntBASIC6.09□□□□□ -1.44
IFT140Q96RY7 MAPK10-303ENST00000641324 3959 ntBASIC6.08□□□□□ -1.44
IFT140Q96RY7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
IFT140Q96RY7 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
IFT140Q96RY7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
IFT140Q96RY7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 RNU6-301P-201ENST00000384277 107 ntBASIC6.08□□□□□ -1.44
IFT140Q96RY7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 RPL21P13-201ENST00000488305 481 ntBASIC6.08□□□□□ -1.44
IFT140Q96RY7 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 MIR4472-2-201ENST00000582069 67 ntBASIC6.08□□□□□ -1.44
IFT140Q96RY7 AL583832.1-201ENST00000603227 784 ntBASIC6.08□□□□□ -1.44
IFT140Q96RY7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 PCA3_2.1-201ENST00000612507 409 ntBASIC6.08□□□□□ -1.44
IFT140Q96RY7 AL157762.1-201ENST00000619612 415 ntBASIC6.08□□□□□ -1.44
IFT140Q96RY7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
IFT140Q96RY7 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
IFT140Q96RY7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
IFT140Q96RY7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
IFT140Q96RY7 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
IFT140Q96RY7 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 RN7SKP74-201ENST00000362849 309 ntBASIC6.07□□□□□ -1.44
IFT140Q96RY7 OR51A6P-201ENST00000418680 1004 ntBASIC6.07□□□□□ -1.44
IFT140Q96RY7 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC6.07□□□□□ -1.44
IFT140Q96RY7 AC095038.2-201ENST00000621464 1070 ntBASIC6.07□□□□□ -1.44
IFT140Q96RY7 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
IFT140Q96RY7 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
IFT140Q96RY7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
IFT140Q96RY7 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
IFT140Q96RY7 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
IFT140Q96RY7 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
IFT140Q96RY7 RNA5SP432-201ENST00000362480 116 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 MIR195-201ENST00000385194 87 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 UBE2V1P2-201ENST00000397758 440 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 MTND4LP20-201ENST00000402379 270 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 AL160175.1-201ENST00000428124 247 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 VN1R25P-201ENST00000443385 738 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 NANOGNBP1-201ENST00000448444 480 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 CCRL1P1-201ENST00000449542 1053 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 AC004069.2-201ENST00000505438 1114 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 AL354976.1-201ENST00000613843 387 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
IFT140Q96RY7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
IFT140Q96RY7 SAMMSON-213ENST00000641336 1521 ntBASIC6.06□□□□□ -1.44
IFT140Q96RY7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
IFT140Q96RY7 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms