Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNA5SP239-201ENST00000410218 129 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 RNA5SP311-201ENST00000411290 116 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC004552.1-201ENST00000419089 348 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 CYP4F29P-201ENST00000420685 446 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AL391219.1-201ENST00000422570 483 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 MTCO1P57-201ENST00000432182 261 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 RPS26P3-201ENST00000470205 348 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 RPS26P28-201ENST00000470806 348 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC090543.2-201ENST00000483963 348 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC004057.1-201ENST00000485827 348 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 HMGB1P47-201ENST00000511281 589 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 RNA5SP154-201ENST00000516193 111 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 RNA5SP315-201ENST00000516340 116 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 RNA5SP312-201ENST00000517068 116 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC022784.5-201ENST00000522241 437 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC007424.1-203ENST00000554613 687 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC023158.1-201ENST00000561632 1025 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC008638.3-201ENST00000603341 463 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC020910.2-201ENST00000603635 610 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC012557.1-201ENST00000607115 611 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC138907.10-201ENST00000623708 983 ntBASIC4.27□□□□□ -1.73
RPRD1AQ96P16 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
RPRD1AQ96P16 AC008725.1-201ENST00000605123 2263 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 RNA5SP130-201ENST00000364431 114 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 MRPS33P4-201ENST00000434892 317 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 RPL7P28-201ENST00000437739 740 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AL353748.1-201ENST00000440753 474 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC006011.1-201ENST00000442758 349 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 NUTF2P7-201ENST00000453086 375 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 RPL38P1-201ENST00000460914 211 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 RPL21P71-201ENST00000465598 459 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC010683.1-201ENST00000473673 378 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC093824.1-201ENST00000508796 343 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 MIR2116-201ENST00000517221 80 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 RFPL1S-203ENST00000539579 330 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 TOMM20P2-201ENST00000540082 421 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AL121834.1-201ENST00000572284 509 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC010680.3-201ENST00000604215 520 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AL049844.2-201ENST00000604280 628 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AL096803.3-201ENST00000609032 532 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 ZYXP1-201ENST00000617638 118 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 LINC00216-201ENST00000623548 1126 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 AC112484.5-201ENST00000624189 228 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 CFTRP2-201ENST00000634304 199 ntBASIC4.26□□□□□ -1.73
RPRD1AQ96P16 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RPRD1AQ96P16 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC011266.1-201ENST00000624119 3569 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC105074.1-201ENST00000623380 3095 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AL031985.3-201ENST00000565390 2449 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 ENSAP1-201ENST00000392855 326 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 RPL31P52-201ENST00000407532 367 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.25□□□□□ -1.73
RPRD1AQ96P16 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.25□□□□□ -1.73
RPRD1AQ96P16 RAD23BP3-201ENST00000454157 1152 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms