Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 AL512661.1-201ENST00000434586 1253 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX1Q15475 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX1Q15475 RNFT1P2-201ENST00000443064 757 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 RPL21P133-201ENST00000443666 476 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 AL591363.1-201ENST00000450091 483 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 RPS20P4-201ENST00000461659 355 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 RPS23P7-201ENST00000466210 444 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 RPL7P1-201ENST00000468161 747 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 RPL7P9-201ENST00000468715 747 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX1Q15475 RN7SL271P-201ENST00000487601 295 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 HAUS1P3-201ENST00000523909 662 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX1Q15475 TVP23BP1-201ENST00000557500 617 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 MIR4277-201ENST00000578298 84 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.17□□□□□ -1.74
SIX1Q15475 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 BNIP3P31-201ENST00000604515 566 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.17□□□□□ -1.74
SIX1Q15475 AC018645.2-201ENST00000609151 472 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AP001033.2-201ENST00000609701 1003 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 MIR8084-201ENST00000614105 89 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC103858.2-201ENST00000621471 543 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 AC010872.1-201ENST00000624225 675 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 MTCO1P4-201ENST00000520516 1409 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.17□□□□□ -1.74
SIX1Q15475 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 IPO8P1-201ENST00000455509 3109 ntBASIC4.17□□□□□ -1.74
SIX1Q15475 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SIX1Q15475 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SIX1Q15475 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.16□□□□□ -1.74
SIX1Q15475 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.16□□□□□ -1.74
SIX1Q15475 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SIX1Q15475 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SIX1Q15475 OR4K17-201ENST00000315543 1032 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 RPL32P3-201ENST00000359025 275 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 RNA5SP366-201ENST00000365454 123 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SIX1Q15475 RNU6-1320P-201ENST00000390838 107 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 U3.22-201ENST00000391120 215 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 RNU6-1269P-201ENST00000391139 107 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL590806.1-201ENST00000415818 853 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC091390.1-201ENST00000433904 331 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 TMX2P1-201ENST00000436507 708 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AC083863.1-201ENST00000438811 231 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL450263.2-201ENST00000439400 589 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 GXYLT1P1-201ENST00000446657 490 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.16□□□□□ -1.74
SIX1Q15475 Z95152.1-201ENST00000453556 656 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL133477.1-201ENST00000457472 514 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 RNU6-599P-201ENST00000459383 107 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 RNU6-1193P-201ENST00000459461 107 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AC011276.1-201ENST00000469688 323 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 RPL29P14-201ENST00000495837 428 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.16□□□□□ -1.74
SIX1Q15475 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SIX1Q15475 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC109635.6-201ENST00000525487 1113 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.16□□□□□ -1.74
SIX1Q15475 PSMB7P1-201ENST00000556349 514 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AC025918.2-201ENST00000558683 763 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AC104072.1-201ENST00000568817 668 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.16□□□□□ -1.74
SIX1Q15475 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC006116.5-201ENST00000591936 559 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.16□□□□□ -1.74
SIX1Q15475 AC084373.1-201ENST00000603311 235 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL390816.3-201ENST00000604527 1066 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 AL451044.1-201ENST00000604867 238 ntBASIC4.16□□□□□ -1.74
SIX1Q15475 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.16□□□□□ -1.74
SIX1Q15475 AL139022.2-201ENST00000606934 443 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms