Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
HSPG2P98160 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC2.25□□□□□ -2.05
HSPG2P98160 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HSPG2P98160 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 TAF9BP1-201ENST00000396646 746 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 OR51A6P-201ENST00000418680 1004 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 CCDC75P1-201ENST00000469247 791 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.25□□□□□ -2.05
HSPG2P98160 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC2.25□□□□□ -2.05
HSPG2P98160 AL512310.1-201ENST00000548639 172 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 AC103881.1-201ENST00000603476 538 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AL590240.3-201ENST00000621416 943 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HSPG2P98160 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 AP002001.2-201ENST00000529025 1469 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC2.25□□□□□ -2.05
HSPG2P98160 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC2.25□□□□□ -2.05
HSPG2P98160 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC2.25□□□□□ -2.05
HSPG2P98160 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.25□□□□□ -2.05
HSPG2P98160 LARP7P3-201ENST00000579888 337 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 AC104662.1-201ENST00000604448 511 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 U4.6-201ENST00000621618 127 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 AL137790.1-201ENST00000634283 177 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HSPG2P98160 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HSPG2P98160 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
HSPG2P98160 MAPK10-320ENST00000641462 6696 ntBASIC2.25□□□□□ -2.05
HSPG2P98160 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 AC104623.2-202ENST00000623477 4002 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 OR5J1P-201ENST00000313544 939 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 UBTFL3-201ENST00000418934 1024 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 RPF2P1-201ENST00000424137 906 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.24□□□□□ -2.05
HSPG2P98160 UBTFL6-201ENST00000477929 1024 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.24□□□□□ -2.05
HSPG2P98160 RNA5SP164-201ENST00000516533 110 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC090151.1-201ENST00000520784 730 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 BANCR-201ENST00000624238 473 ntTSL 2 BASIC2.24□□□□□ -2.05
HSPG2P98160 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC083837.1-201ENST00000565297 2994 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC2.24□□□□□ -2.05
HSPG2P98160 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.24□□□□□ -2.05
HSPG2P98160 HMGB3P16-201ENST00000508037 287 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC008966.2-201ENST00000606157 453 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC015802.5-201ENST00000607478 399 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AL162274.2-201ENST00000614406 332 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
HSPG2P98160 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 LINC01109-201ENST00000603837 3081 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.24□□□□□ -2.05
HSPG2P98160 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 FRG1CP-201ENST00000358464 769 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AC234772.1-201ENST00000377927 937 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.24□□□□□ -2.05
HSPG2P98160 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 RAB28P3-201ENST00000448325 597 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 CREM-238ENST00000488741 651 ntTSL 2 BASIC2.24□□□□□ -2.05
HSPG2P98160 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.24□□□□□ -2.05
HSPG2P98160 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC093732.2-201ENST00000607950 274 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.24□□□□□ -2.05
HSPG2P98160 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HSPG2P98160 AL136360.1-201ENST00000503377 1900 ntBASIC2.24□□□□□ -2.05
HSPG2P98160 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms