Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL671862.1-201ENST00000515851 349 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 SNORA70.11-201ENST00000515987 138 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 SNORA70.13-201ENST00000516116 138 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.86□□□□□ -1.63
SUMO3P55854 AC126177.5-201ENST00000549599 178 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.86□□□□□ -1.63
SUMO3P55854 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.86□□□□□ -1.63
SUMO3P55854 AC124068.1-201ENST00000563131 678 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.86□□□□□ -1.63
SUMO3P55854 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.86□□□□□ -1.63
SUMO3P55854 KPNA2P3-201ENST00000584190 848 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 AC006272.2-201ENST00000594725 163 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 AC009597.2-201ENST00000604659 592 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 AC090948.2-201ENST00000607363 564 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.86□□□□□ -1.63
SUMO3P55854 MIR7844-201ENST00000616161 122 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.86□□□□□ -1.63
SUMO3P55854 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SUMO3P55854 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC4.86□□□□□ -1.63
SUMO3P55854 CASC19-222ENST00000641321 1173 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 CASC19-264ENST00000641912 1184 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SUMO3P55854 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SUMO3P55854 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SUMO3P55854 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SUMO3P55854 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SUMO3P55854 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SUMO3P55854 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SUMO3P55854 OR55B1P-203ENST00000641518 2602 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
SUMO3P55854 AC109446.4-201ENST00000623235 2755 ntBASIC4.86□□□□□ -1.63
SUMO3P55854 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SUMO3P55854 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.85□□□□□ -1.63
SUMO3P55854 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SUMO3P55854 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SUMO3P55854 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 AC011155.1-201ENST00000316512 456 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC005294.1-201ENST00000355509 281 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 RNA5SP183-201ENST00000362452 119 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 RNU6-462P-201ENST00000362659 105 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
SUMO3P55854 BTF3L4P1-201ENST00000413813 468 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.85□□□□□ -1.63
SUMO3P55854 MTCO3P5-201ENST00000433620 714 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AL161722.2-201ENST00000434731 981 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 UBE2FP3-201ENST00000436366 524 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.85□□□□□ -1.63
SUMO3P55854 THAP5P1-201ENST00000439089 262 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 MTND1P30-201ENST00000441241 901 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC073648.4-201ENST00000442655 781 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 GAPDHP14-201ENST00000450472 937 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 OR6C5P-201ENST00000452388 923 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 TPTE2P5-203ENST00000458118 728 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.85□□□□□ -1.63
SUMO3P55854 AC097493.1-201ENST00000463958 372 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 SIAH1P1-201ENST00000479411 923 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC090013.1-201ENST00000485147 480 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.85□□□□□ -1.63
SUMO3P55854 AC098976.1-201ENST00000513014 541 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 SNORD116-26-201ENST00000516006 96 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC022790.1-201ENST00000522872 204 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.85□□□□□ -1.63
SUMO3P55854 AC024909.2-201ENST00000553035 286 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 RN7SL290P-201ENST00000578661 300 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 MIR4637-201ENST00000582405 84 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.85□□□□□ -1.63
SUMO3P55854 MTCYBP22-201ENST00000603788 447 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SUMO3P55854 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.85□□□□□ -1.63
SUMO3P55854 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.85□□□□□ -1.63
SUMO3P55854 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.85□□□□□ -1.63
SUMO3P55854 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.85□□□□□ -1.63
SUMO3P55854 AC006927.3-201ENST00000638789 384 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 OR4G11P-202ENST00000642116 1414 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.85□□□□□ -1.63
SUMO3P55854 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.85□□□□□ -1.63
SUMO3P55854 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SUMO3P55854 AL022322.2-201ENST00000624072 20397 ntBASIC4.85□□□□□ -1.63
SUMO3P55854 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SUMO3P55854 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SUMO3P55854 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SUMO3P55854 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SUMO3P55854 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SUMO3P55854 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SUMO3P55854 AC008079.2-201ENST00000623543 20396 ntBASIC4.84□□□□□ -1.63
SUMO3P55854 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms