Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARSP26640 MTND5P30-201ENST00000452896 1731 ntBASIC6.81□□□□□ -1.32
VARSP26640 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARSP26640 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.81□□□□□ -1.32
VARSP26640 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VARSP26640 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
VARSP26640 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARSP26640 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
VARSP26640 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
VARSP26640 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 DDX18P4-201ENST00000511690 1966 ntBASIC6.8□□□□□ -1.32
VARSP26640 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.8□□□□□ -1.32
VARSP26640 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 ZMYND11-204ENST00000381604 4066 ntTSL 5 BASIC6.8□□□□□ -1.32
VARSP26640 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VARSP26640 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 RNU6-552P-201ENST00000362869 119 ntBASIC6.8□□□□□ -1.32
VARSP26640 RNA5SP172-201ENST00000365061 118 ntBASIC6.8□□□□□ -1.32
VARSP26640 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 Y_RNA.447-201ENST00000384184 113 ntBASIC6.8□□□□□ -1.32
VARSP26640 RNY1P14-201ENST00000384426 108 ntBASIC6.8□□□□□ -1.32
VARSP26640 RNU6-903P-201ENST00000391270 109 ntBASIC6.8□□□□□ -1.32
VARSP26640 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
VARSP26640 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.8□□□□□ -1.32
VARSP26640 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 ARL5AP1-201ENST00000418991 388 ntBASIC6.8□□□□□ -1.32
VARSP26640 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 Z82198.3-201ENST00000421145 199 ntBASIC6.8□□□□□ -1.32
VARSP26640 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 AC005019.1-201ENST00000436455 431 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC012075.1-201ENST00000436549 580 ntBASIC6.8□□□□□ -1.32
VARSP26640 DNAJC19P5-201ENST00000443295 316 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.8□□□□□ -1.32
VARSP26640 RPL7L1P8-201ENST00000469911 741 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC091982.1-202ENST00000473923 343 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC128716.1-201ENST00000475129 166 ntBASIC6.8□□□□□ -1.32
VARSP26640 MYL6P4-201ENST00000477911 453 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC002456.2-201ENST00000509356 380 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC022034.1-201ENST00000512867 2156 ntBASIC6.8□□□□□ -1.32
VARSP26640 SCARNA11.1-201ENST00000516918 132 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC6.8□□□□□ -1.32
VARSP26640 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 AP000763.2-201ENST00000540641 163 ntBASIC6.8□□□□□ -1.32
VARSP26640 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC6.8□□□□□ -1.32
VARSP26640 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC6.8□□□□□ -1.32
VARSP26640 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.8□□□□□ -1.32
VARSP26640 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.8□□□□□ -1.32
VARSP26640 AC089984.3-201ENST00000552838 363 ntBASIC6.8□□□□□ -1.32
VARSP26640 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.8□□□□□ -1.32
VARSP26640 FXNP1-201ENST00000555153 337 ntBASIC6.8□□□□□ -1.32
VARSP26640 AL137100.2-201ENST00000555786 315 ntBASIC6.8□□□□□ -1.32
VARSP26640 AL031846.1-201ENST00000560933 314 ntBASIC6.8□□□□□ -1.32
VARSP26640 SULT1C2P1-202ENST00000562418 459 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC124068.1-201ENST00000563131 678 ntBASIC6.8□□□□□ -1.32
VARSP26640 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 AC022884.3-201ENST00000579571 248 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 AL359704.2-201ENST00000604335 521 ntBASIC6.8□□□□□ -1.32
VARSP26640 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.8□□□□□ -1.32
VARSP26640 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.8□□□□□ -1.32
VARSP26640 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 AL662795.2-201ENST00000624252 3706 ntBASIC6.8□□□□□ -1.32
VARSP26640 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 AC007159.1-201ENST00000566529 4706 ntBASIC6.8□□□□□ -1.32
VARSP26640 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 XPOTP1-201ENST00000443317 2398 ntBASIC6.8□□□□□ -1.32
VARSP26640 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.8□□□□□ -1.32
VARSP26640 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
VARSP26640 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.79□□□□□ -1.32
VARSP26640 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
VARSP26640 AL512646.1-201ENST00000269395 1077 ntBASIC6.79□□□□□ -1.32
VARSP26640 RNU6-984P-201ENST00000363236 109 ntBASIC6.79□□□□□ -1.32
VARSP26640 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.79□□□□□ -1.32
VARSP26640 RNU6-601P-201ENST00000384540 107 ntBASIC6.79□□□□□ -1.32
VARSP26640 RN7SKP222-201ENST00000410651 315 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC6.79□□□□□ -1.32
VARSP26640 AC007562.1-201ENST00000421819 517 ntBASIC6.79□□□□□ -1.32
VARSP26640 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.79□□□□□ -1.32
VARSP26640 AC009965.2-201ENST00000425328 970 ntBASIC6.79□□□□□ -1.32
VARSP26640 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC6.79□□□□□ -1.32
VARSP26640 AL022324.2-201ENST00000434827 780 ntBASIC6.79□□□□□ -1.32
VARSP26640 AC073109.1-201ENST00000445066 978 ntBASIC6.79□□□□□ -1.32
VARSP26640 RPS15AP1-201ENST00000457423 391 ntBASIC6.79□□□□□ -1.32
VARSP26640 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC6.79□□□□□ -1.32
VARSP26640 RPS29P15-201ENST00000458329 171 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms