Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
FREM3P0C091 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
FREM3P0C091 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
FREM3P0C091 OR51A6P-201ENST00000418680 1004 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 TCEA1P2-201ENST00000420496 906 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 YME1L1P1-201ENST00000429435 297 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 BX119904.1-201ENST00000432026 348 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 ARL4AP4-201ENST00000434170 518 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.4□□□□□ -1.86
FREM3P0C091 AF228730.2-201ENST00000438784 848 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.4□□□□□ -1.86
FREM3P0C091 AL133372.1-201ENST00000493565 745 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 SNORA67.7-201ENST00000516664 135 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.4□□□□□ -1.86
FREM3P0C091 OR4A12P-201ENST00000530847 918 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.4□□□□□ -1.86
FREM3P0C091 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.4□□□□□ -1.86
FREM3P0C091 BNIP3P33-201ENST00000598912 569 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 AC019176.2-201ENST00000611579 315 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 AC084757.4-201ENST00000616350 526 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 AC016957.2-201ENST00000616998 848 ntBASIC3.4□□□□□ -1.86
FREM3P0C091 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.4□□□□□ -1.86
FREM3P0C091 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
FREM3P0C091 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.4□□□□□ -1.87
FREM3P0C091 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
FREM3P0C091 FAM35DP-201ENST00000323387 2712 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.4□□□□□ -1.87
FREM3P0C091 AC073073.2-201ENST00000609827 2578 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.4□□□□□ -1.87
FREM3P0C091 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.4□□□□□ -1.87
FREM3P0C091 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
FREM3P0C091 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 AC068533.1-201ENST00000418542 415 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.4□□□□□ -1.87
FREM3P0C091 AL358232.1-201ENST00000448030 501 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 snoU13.22-201ENST00000459428 104 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.4□□□□□ -1.87
FREM3P0C091 SUMO2P20-201ENST00000520803 283 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.4□□□□□ -1.87
FREM3P0C091 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 AC090912.3-201ENST00000609775 533 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
FREM3P0C091 AL359715.5-201ENST00000623431 443 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.4□□□□□ -1.87
FREM3P0C091 ATE1-AS1-202ENST00000636460 506 ntBASIC3.4□□□□□ -1.87
FREM3P0C091 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FREM3P0C091 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FREM3P0C091 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.39□□□□□ -1.87
FREM3P0C091 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
FREM3P0C091 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
FREM3P0C091 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
FREM3P0C091 AC011503.2-201ENST00000594230 1500 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 RNA5SP322-201ENST00000363617 119 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 PTMAP2-201ENST00000397627 327 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 SNORA57.3-201ENST00000411095 141 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 TCEA1P4-201ENST00000415066 844 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.39□□□□□ -1.87
FREM3P0C091 SEPT7P3-201ENST00000455017 621 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 AC106707.2-201ENST00000484182 374 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 DEFB109D-201ENST00000529497 240 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.39□□□□□ -1.87
FREM3P0C091 KLKP1-201ENST00000595979 403 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 RNU6-84P-201ENST00000607737 102 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 AL139089.1-201ENST00000620372 975 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 AL034408.1-202ENST00000636088 415 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 AC119674.1-207ENST00000641355 633 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 AC018529.3-201ENST00000624212 2254 ntBASIC3.39□□□□□ -1.87
FREM3P0C091 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
FREM3P0C091 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.39□□□□□ -1.87
FREM3P0C091 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
FREM3P0C091 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
FREM3P0C091 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FREM3P0C091 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FREM3P0C091 DUXAP2-201ENST00000519198 589 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.38□□□□□ -1.87
FREM3P0C091 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.38□□□□□ -1.87
FREM3P0C091 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.38□□□□□ -1.87
FREM3P0C091 CR392039.5-201ENST00000623201 510 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 AP003400.2-201ENST00000624036 666 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.38□□□□□ -1.87
FREM3P0C091 AP004289.2-201ENST00000444413 1457 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
FREM3P0C091 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
FREM3P0C091 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
FREM3P0C091 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
FREM3P0C091 MIR670-201ENST00000390142 98 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
FREM3P0C091 ZNF603P-201ENST00000405613 487 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 CBX1P3-201ENST00000413296 527 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 RPL7P4-203ENST00000430239 730 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 CYCSP43-201ENST00000438233 310 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 AC092809.1-201ENST00000441469 474 ntBASIC3.38□□□□□ -1.87
FREM3P0C091 RNU1-95P-201ENST00000516357 160 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms