Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.49□□□□□ -1.69
CCDC188H7C350 RNU6-468P-201ENST00000384003 109 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 SNORA51.8-201ENST00000384234 132 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AL355615.1-201ENST00000406187 641 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 ZNF736P1Y-201ENST00000440402 1276 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
CCDC188H7C350 RAD23BP3-201ENST00000454157 1152 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 RPL35AP15-201ENST00000468042 339 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AC011005.3-201ENST00000491624 395 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 BNIP3P41-201ENST00000503774 571 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC022790.1-201ENST00000522872 204 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC006064.5-201ENST00000541782 248 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
CCDC188H7C350 HMGN2P6-201ENST00000551091 273 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AL109766.1-201ENST00000555080 552 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC023824.3-201ENST00000569003 562 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 MIR4789-201ENST00000577469 82 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AC064801.1-201ENST00000612025 407 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AC008759.3-201ENST00000613300 508 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CCDC188H7C350 AP003476.1-201ENST00000623984 516 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 AC092608.3-201ENST00000625017 386 ntBASIC4.49□□□□□ -1.69
CCDC188H7C350 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.49□□□□□ -1.69
CCDC188H7C350 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
CCDC188H7C350 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC188H7C350 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC188H7C350 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC010928.1-201ENST00000592477 1447 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC018555.1-201ENST00000567548 1980 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 OR4K17-201ENST00000315543 1032 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC188H7C350 RNA5SP507-201ENST00000363603 121 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC097374.1-203ENST00000400783 485 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 HNRNPDP2-201ENST00000406475 478 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 RNU2-6P-201ENST00000411404 190 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 PRELID3BP11-201ENST00000414230 479 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC188H7C350 OR5AW1P-201ENST00000426334 1006 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 RPL7P4-203ENST00000430239 730 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AL096829.2-201ENST00000446582 742 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 HMGN1P5-201ENST00000448591 263 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 HMGB3P21-201ENST00000452483 547 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 GTF2IP12-201ENST00000456547 356 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC096992.1-201ENST00000459808 709 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC188H7C350 RPL7P22-201ENST00000466005 733 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC053481.1-201ENST00000467217 306 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC004815.1-201ENST00000484185 331 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 RPS6P4-201ENST00000494693 758 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 FTH1P24-201ENST00000503502 462 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC147055.3-201ENST00000510547 851 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC110775.1-201ENST00000513721 462 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 NPM1P6-201ENST00000521088 871 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC188H7C350 OR5M2P-201ENST00000529003 936 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC087894.1-201ENST00000538359 518 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC188H7C350 MIR4458-201ENST00000578872 75 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC091042.1-201ENST00000579213 173 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 MIR4737-201ENST00000583979 81 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AL031320.1-201ENST00000604177 357 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AL136295.6-201ENST00000610486 658 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AL133243.1-201ENST00000614487 366 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AC009704.2-201ENST00000618739 483 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC007546.1-201ENST00000619452 559 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
CCDC188H7C350 AL590396.4-201ENST00000636779 956 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 AC106858.1-201ENST00000637497 429 ntBASIC4.48□□□□□ -1.69
CCDC188H7C350 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC188H7C350 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC188H7C350 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CCDC188H7C350 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms