Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
HTTP42858 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HTTP42858 AL357075.1-201ENST00000404107 726 ntBASIC3.95□□□□□ -1.78
HTTP42858 AC009506.2-201ENST00000420635 840 ntBASIC3.95□□□□□ -1.78
HTTP42858 SETP9-201ENST00000423837 832 ntBASIC3.95□□□□□ -1.78
HTTP42858 SDCBPP2-201ENST00000424643 885 ntBASIC3.95□□□□□ -1.78
HTTP42858 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.95□□□□□ -1.78
HTTP42858 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.95□□□□□ -1.78
HTTP42858 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.95□□□□□ -1.78
HTTP42858 NPM1P5-201ENST00000557228 838 ntBASIC3.95□□□□□ -1.78
HTTP42858 AL163642.2-201ENST00000604722 1019 ntBASIC3.95□□□□□ -1.78
HTTP42858 MIR7851-201ENST00000610611 160 ntBASIC3.95□□□□□ -1.78
HTTP42858 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HTTP42858 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HTTP42858 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HTTP42858 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HTTP42858 SNORA5B-201ENST00000363786 132 ntBASIC3.94□□□□□ -1.78
HTTP42858 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HTTP42858 Y_RNA.638-201ENST00000459374 113 ntBASIC3.94□□□□□ -1.78
HTTP42858 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
HTTP42858 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.94□□□□□ -1.78
HTTP42858 AC100770.1-201ENST00000532310 322 ntBASIC3.94□□□□□ -1.78
HTTP42858 AL121576.1-201ENST00000556055 276 ntBASIC3.94□□□□□ -1.78
HTTP42858 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.94□□□□□ -1.78
HTTP42858 AC069209.1-201ENST00000619282 651 ntBASIC3.94□□□□□ -1.78
HTTP42858 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HTTP42858 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.94□□□□□ -1.78
HTTP42858 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC3.94□□□□□ -1.78
HTTP42858 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HTTP42858 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
HTTP42858 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HTTP42858 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC3.94□□□□□ -1.78
HTTP42858 AC007685.1-201ENST00000329806 452 ntBASIC3.94□□□□□ -1.78
HTTP42858 NDUFB1P1-201ENST00000435191 180 ntBASIC3.94□□□□□ -1.78
HTTP42858 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.94□□□□□ -1.78
HTTP42858 AC109925.1-201ENST00000478069 331 ntBASIC3.94□□□□□ -1.78
HTTP42858 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.94□□□□□ -1.78
HTTP42858 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.94□□□□□ -1.78
HTTP42858 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.94□□□□□ -1.78
HTTP42858 Z95327.2-201ENST00000414579 1873 ntBASIC3.94□□□□□ -1.78
HTTP42858 RN7SKP111-201ENST00000410349 271 ntBASIC3.93□□□□□ -1.78
HTTP42858 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.93□□□□□ -1.78
HTTP42858 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.93□□□□□ -1.78
HTTP42858 VN1R104P-201ENST00000505115 1009 ntBASIC3.93□□□□□ -1.78
HTTP42858 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HTTP42858 AP003122.5-201ENST00000527668 3766 ntBASIC3.93□□□□□ -1.78
HTTP42858 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.93□□□□□ -1.78
HTTP42858 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HTTP42858 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HTTP42858 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
HTTP42858 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HTTP42858 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HTTP42858 AC004448.2-201ENST00000422360 586 ntBASIC3.93□□□□□ -1.78
HTTP42858 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HTTP42858 AC135001.1-201ENST00000544546 283 ntBASIC3.93□□□□□ -1.78
HTTP42858 AC008011.1-201ENST00000545989 227 ntBASIC3.93□□□□□ -1.78
HTTP42858 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC3.93□□□□□ -1.78
HTTP42858 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.93□□□□□ -1.78
HTTP42858 MIR4276-201ENST00000584832 70 ntBASIC3.93□□□□□ -1.78
HTTP42858 PRELID3BP3-201ENST00000584963 545 ntBASIC3.93□□□□□ -1.78
HTTP42858 AL133247.2-201ENST00000603236 482 ntBASIC3.93□□□□□ -1.78
HTTP42858 AP003392.5-201ENST00000607857 415 ntBASIC3.93□□□□□ -1.78
HTTP42858 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.93□□□□□ -1.78
HTTP42858 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
HTTP42858 AL513478.4-201ENST00000641636 310 ntBASIC3.93□□□□□ -1.78
HTTP42858 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HTTP42858 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC3.93□□□□□ -1.78
HTTP42858 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
HTTP42858 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC3.93□□□□□ -1.78
HTTP42858 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
HTTP42858 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HTTP42858 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HTTP42858 MTHFD2P2-201ENST00000407725 247 ntBASIC3.92□□□□□ -1.78
HTTP42858 AC011742.1-201ENST00000431448 434 ntBASIC3.92□□□□□ -1.78
HTTP42858 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
HTTP42858 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.92□□□□□ -1.78
HTTP42858 AL157394.1-201ENST00000562983 1224 ntBASIC3.92□□□□□ -1.78
HTTP42858 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HTTP42858 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HTTP42858 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HTTP42858 AL359643.1-201ENST00000404109 423 ntBASIC3.92□□□□□ -1.78
HTTP42858 RNA5SP229-201ENST00000410809 99 ntBASIC3.92□□□□□ -1.78
HTTP42858 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.92□□□□□ -1.78
HTTP42858 AL513175.1-201ENST00000431492 780 ntBASIC3.92□□□□□ -1.78
HTTP42858 CCDC75P1-201ENST00000469247 791 ntBASIC3.92□□□□□ -1.78
HTTP42858 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.92□□□□□ -1.78
HTTP42858 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HTTP42858 AC002069.2-201ENST00000603580 883 ntBASIC3.92□□□□□ -1.78
HTTP42858 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.92□□□□□ -1.78
HTTP42858 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HTTP42858 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HTTP42858 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HTTP42858 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HTTP42858 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HTTP42858 AL024507.1-201ENST00000412741 274 ntBASIC3.92□□□□□ -1.78
HTTP42858 AC008885.1-201ENST00000514930 301 ntBASIC3.92□□□□□ -1.78
HTTP42858 AP001153.1-201ENST00000641024 338 ntBASIC3.92□□□□□ -1.78
HTTP42858 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HTTP42858 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.92□□□□□ -1.78
HTTP42858 AL136360.1-201ENST00000503377 1900 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms