Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC087763.1-201ENST00000603391 286 ntBASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 AC000068.2-201ENST00000608816 460 ntBASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 AL118522.2-201ENST00000616045 615 ntBASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 AC234782.5-201ENST00000617723 324 ntBASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 AC138649.3-201ENST00000622154 254 ntBASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 AL355488.2-201ENST00000609909 2850 ntBASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
CSB-PGBD3P0DP91 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 RNU4-73P-201ENST00000363164 141 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 RPL31P1-201ENST00000398116 372 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 FAT1P1-201ENST00000406588 507 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 FCF1P10-201ENST00000407590 479 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 RNU6-272P-201ENST00000411028 104 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 RPL7P36-201ENST00000444633 681 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AL035551.1-201ENST00000446931 348 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AL133244.1-201ENST00000456007 258 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC008562.1-201ENST00000521763 330 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 HIGD1AP6-201ENST00000521833 279 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC126177.5-201ENST00000549599 178 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 CR383656.6-201ENST00000550518 394 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC008536.2-201ENST00000607284 349 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC093388.1-201ENST00000609166 430 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC126915.2-201ENST00000610957 190 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC091834.1-201ENST00000614543 472 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 CCL14-204ENST00000622526 472 ntTSL 3 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 ZNF402P-201ENST00000404435 3100 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 MSL3P1-202ENST00000440028 1468 ntBASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.54□□□□□ -1.2
CSB-PGBD3P0DP91 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RPL21P132-201ENST00000331267 462 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RNU2-6P-201ENST00000411404 190 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC005033.1-201ENST00000428904 813 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 MTND4LP10-201ENST00000435146 291 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 NDUFA5P4-201ENST00000436704 385 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RPS23P9-201ENST00000448848 438 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RPL7AP52-201ENST00000458096 790 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RPS23P2-201ENST00000463671 415 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RPS4XP15-201ENST00000489210 795 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 NDUFB5P1-201ENST00000508134 564 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC105384.2-201ENST00000508433 640 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 RNU6-1261P-201ENST00000517194 104 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AP002453.2-201ENST00000533503 320 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 MIR4637-201ENST00000582405 84 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC020914.6-201ENST00000594327 272 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC005261.5-201ENST00000596280 355 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC019193.2-201ENST00000610012 634 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC092650.2-201ENST00000619984 902 ntBASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CSB-PGBD3P0DP91 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms