Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.38□□□□□ -1.71
TPM1P09493 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.38□□□□□ -1.71
TPM1P09493 MIR4480-201ENST00000582492 71 ntBASIC4.38□□□□□ -1.71
TPM1P09493 AC069366.1-201ENST00000583159 838 ntBASIC4.38□□□□□ -1.71
TPM1P09493 AC020915.5-201ENST00000596836 964 ntBASIC4.38□□□□□ -1.71
TPM1P09493 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.38□□□□□ -1.71
TPM1P09493 AC139769.3-201ENST00000618383 175 ntBASIC4.38□□□□□ -1.71
TPM1P09493 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.38□□□□□ -1.71
TPM1P09493 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.38□□□□□ -1.71
TPM1P09493 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
TPM1P09493 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.38□□□□□ -1.71
TPM1P09493 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.38□□□□□ -1.71
TPM1P09493 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
TPM1P09493 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM1P09493 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
TPM1P09493 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TPM1P09493 RNU6-532P-201ENST00000384318 107 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM1P09493 AC069213.2-201ENST00000420238 366 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AC017083.1-201ENST00000428093 483 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM1P09493 HIGD1AP4-201ENST00000430194 280 ntBASIC4.37□□□□□ -1.71
TPM1P09493 RPS29P17-201ENST00000430795 166 ntBASIC4.37□□□□□ -1.71
TPM1P09493 COX6B1P7-201ENST00000430845 235 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.37□□□□□ -1.71
TPM1P09493 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.37□□□□□ -1.71
TPM1P09493 RPS4XP4-201ENST00000443195 763 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.37□□□□□ -1.71
TPM1P09493 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM1P09493 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM1P09493 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM1P09493 AK3P4-201ENST00000504283 583 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM1P09493 AC111000.3-201ENST00000508057 576 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM1P09493 AC099522.1-202ENST00000514718 367 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.37□□□□□ -1.71
TPM1P09493 TRAV8-5-201ENST00000537369 341 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.37□□□□□ -1.71
TPM1P09493 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM1P09493 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.37□□□□□ -1.71
TPM1P09493 AC022884.3-201ENST00000579571 248 ntBASIC4.37□□□□□ -1.71
TPM1P09493 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.37□□□□□ -1.71
TPM1P09493 FAM60CP-201ENST00000591086 664 ntBASIC4.37□□□□□ -1.71
TPM1P09493 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM1P09493 AP003072.4-201ENST00000624580 310 ntBASIC4.37□□□□□ -1.71
TPM1P09493 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM1P09493 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.37□□□□□ -1.71
TPM1P09493 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TPM1P09493 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
TPM1P09493 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
TPM1P09493 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
TPM1P09493 PRO1804-201ENST00000623780 2050 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AL137100.1-201ENST00000556703 1620 ntBASIC4.36□□□□□ -1.71
TPM1P09493 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
TPM1P09493 CEP170P1-201ENST00000502249 4587 ntBASIC4.36□□□□□ -1.71
TPM1P09493 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.36□□□□□ -1.71
TPM1P09493 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TPM1P09493 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
TPM1P09493 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
TPM1P09493 AC079741.1-201ENST00000321498 212 ntBASIC4.36□□□□□ -1.71
TPM1P09493 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
TPM1P09493 RN7SKP103-201ENST00000363848 320 ntBASIC4.36□□□□□ -1.71
TPM1P09493 U3.15-201ENST00000365398 212 ntBASIC4.36□□□□□ -1.71
TPM1P09493 ATP5F1P4-201ENST00000397288 746 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AC011933.1-201ENST00000413334 321 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM1P09493 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM1P09493 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.36□□□□□ -1.71
TPM1P09493 RPS12P23-201ENST00000419579 400 ntBASIC4.36□□□□□ -1.71
TPM1P09493 CHIAP3-201ENST00000423668 1133 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM1P09493 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM1P09493 Z95152.1-201ENST00000453556 656 ntBASIC4.36□□□□□ -1.71
TPM1P09493 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
TPM1P09493 snoU13.1-201ENST00000459157 104 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AC116533.1-201ENST00000459748 321 ntBASIC4.36□□□□□ -1.71
TPM1P09493 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM1P09493 RPL7L1P8-201ENST00000469911 741 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AC023050.1-201ENST00000498198 304 ntBASIC4.36□□□□□ -1.71
TPM1P09493 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.36□□□□□ -1.71
TPM1P09493 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.36□□□□□ -1.71
TPM1P09493 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
TPM1P09493 AC092747.2-201ENST00000545069 983 ntBASIC4.36□□□□□ -1.71
TPM1P09493 MIR4330-201ENST00000579077 105 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.36□□□□□ -1.71
TPM1P09493 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
TPM1P09493 MTCO2P22-201ENST00000603246 681 ntBASIC4.36□□□□□ -1.71
TPM1P09493 RPL23AP61-201ENST00000623642 466 ntBASIC4.36□□□□□ -1.71
TPM1P09493 AC119674.1-212ENST00000641155 993 ntBASIC4.36□□□□□ -1.71
TPM1P09493 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.36□□□□□ -1.71
TPM1P09493 AC096656.1-201ENST00000623826 1364 ntBASIC4.36□□□□□ -1.71
TPM1P09493 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.35□□□□□ -1.71
TPM1P09493 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.35□□□□□ -1.71
TPM1P09493 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TPM1P09493 AC119751.6-201ENST00000416712 186 ntBASIC4.35□□□□□ -1.71
TPM1P09493 NPM1P34-201ENST00000428821 893 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms