Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.7□□□□□ -1.66
SIX4Q9UIU6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 HSPE1P16-201ENST00000426640 348 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AL035246.1-201ENST00000433554 1255 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 OR10R1P-201ENST00000441524 1141 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 RPS27AP15-201ENST00000447672 466 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 VN1R32P-201ENST00000452234 905 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 CALM1P2-201ENST00000452941 448 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 RPL7P32-201ENST00000457119 744 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC108022.1-201ENST00000493466 478 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC093534.1-201ENST00000504977 132 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC113420.1-201ENST00000507903 571 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 PRELID3BP5-201ENST00000508612 460 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC112673.1-201ENST00000513168 575 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 MTND2P38-201ENST00000522536 667 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC073387.2-201ENST00000604797 784 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 Z99289.3-201ENST00000605586 594 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AL365400.2-201ENST00000605604 902 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC114781.5-201ENST00000615297 108 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AL021997.2-201ENST00000615674 271 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC006386.1-201ENST00000619436 415 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AP000676.4-201ENST00000624659 623 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AP000843.1-201ENST00000624880 701 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 FP325313.1-201ENST00000638228 703 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 AC132825.7-201ENST00000638744 335 ntBASIC4.69□□□□□ -1.66
SIX4Q9UIU6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SIX4Q9UIU6 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 SPATA2P1-201ENST00000431223 2055 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 RPL32P3-201ENST00000359025 275 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 RNU1-132P-201ENST00000364300 164 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC104297.1-201ENST00000393779 870 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AL078604.1-201ENST00000404609 466 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 UBE2V1P11-201ENST00000411559 285 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AL449283.1-202ENST00000418249 604 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC092634.2-201ENST00000428146 1010 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 CETN4P-201ENST00000432407 469 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AL035458.1-201ENST00000433096 585 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 MTCYBP12-201ENST00000440559 1134 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AL358794.1-201ENST00000445689 381 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 RN7SL303P-201ENST00000469773 251 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 NDUFA5P9-201ENST00000472609 340 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 MTCO3P35-201ENST00000485582 781 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC041039.1-201ENST00000485656 536 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 RN7SL691P-201ENST00000494487 301 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC093840.1-201ENST00000511599 336 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC093752.1-206ENST00000511823 336 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 IGHV3-63-201ENST00000518422 341 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 OR10V3P-201ENST00000525712 725 ntBASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SIX4Q9UIU6 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms