Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC025574.1-201ENST00000554784 1653 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC021755.1-201ENST00000559747 1447 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL391994.1-201ENST00000254724 282 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 MIR600-201ENST00000385007 98 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL136133.1-201ENST00000413694 376 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 PRELID3BP11-201ENST00000414230 479 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC233981.1-201ENST00000423224 461 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC009238.2-201ENST00000431026 355 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 RPL37P1-201ENST00000432310 284 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC097262.1-201ENST00000452559 548 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 MTCO3P11-201ENST00000455103 774 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 Z92846.1-201ENST00000456203 268 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 RPL30P6-201ENST00000475925 342 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC147055.4-201ENST00000504399 745 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC025674.1-201ENST00000507074 324 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 RNU6-202P-201ENST00000515998 96 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 DPRXP4-201ENST00000578053 568 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC095055.1-201ENST00000603472 1113 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC006270.3-201ENST00000605967 1036 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 OR2AS2P-201ENST00000606902 342 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC005962.2-201ENST00000611427 652 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC009163.6-201ENST00000612367 342 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AP000648.2-201ENST00000624182 404 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC026634.1-201ENST00000634369 198 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 MIR4302-201ENST00000638058 60 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC073869.10-201ENST00000642016 354 ntBASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.09□□□□□ -1.59
TRIM54Q9BYV2 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM54Q9BYV2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.09□□□□□ -1.6
TRIM54Q9BYV2 AL118496.1-201ENST00000440201 1812 ntBASIC5.09□□□□□ -1.6
TRIM54Q9BYV2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM54Q9BYV2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
TRIM54Q9BYV2 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC016716.1-201ENST00000265882 708 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 RN7SKP160-201ENST00000363804 340 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 PRRC2CP1-201ENST00000404428 159 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AL390316.1-201ENST00000406279 553 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 HYKK-202ENST00000408962 847 ntTSL 5 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 FCF1P2-201ENST00000415284 583 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 OR6C64P-201ENST00000419708 825 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 MTCO3P1-205ENST00000422088 832 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC008072.1-201ENST00000434254 824 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 RPS25P9-201ENST00000435591 252 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 GSTA7P-201ENST00000438425 448 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 ISCA1P2-201ENST00000438679 421 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 AC108463.1-201ENST00000450258 347 ntBASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC5.08□□□□□ -1.6
TRIM54Q9BYV2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms